RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
ERCC2-202ENST00000391942 MT1EP04732 61 aa6.27□□□□□ -1.41
ERCC2-202ENST00000391942 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
ERCC2-202ENST00000391942 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
ERCC2-202ENST00000391942 SPRR2EP22531 72 aa6.21□□□□□ -1.42
ERCC2-202ENST00000391942 SPRR2BP35325 72 aa6.21□□□□□ -1.42
ERCC2-202ENST00000391942 SPRR2AP35326 72 aa6.21□□□□□ -1.42
ERCC2-202ENST00000391942 NEBP20929 6669 aa6.19□□□□□ -1.42
ERCC2-202ENST00000391942 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
ERCC2-202ENST00000391942 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
ERCC2-202ENST00000391942 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.44
ERCC2-202ENST00000391942 MT1LQ93083 61 aa6.09□□□□□ -1.44
ERCC2-202ENST00000391942 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.44
ERCC2-202ENST00000391942 MT1GP13640 62 aa5.99□□□□□ -1.45
ERCC2-202ENST00000391942 SPRR2DP22532 72 aa5.99□□□□□ -1.45
ERCC2-202ENST00000391942 MT1MQ8N339 61 aa5.93□□□□□ -1.46
ERCC2-202ENST00000391942 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
ERCC2-202ENST00000391942 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
ERCC2-202ENST00000391942 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
ERCC2-202ENST00000391942 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
ERCC2-202ENST00000391942 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
ERCC2-202ENST00000391942 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
ERCC2-202ENST00000391942 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
ERCC2-202ENST00000391942 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
ERCC2-202ENST00000391942 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
ERCC2-202ENST00000391942 INE1O15225 51 aa5.75□□□□□ -1.49
ERCC2-202ENST00000391942 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
ERCC2-202ENST00000391942 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
ERCC2-202ENST00000391942 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
ERCC2-202ENST00000391942 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
ERCC2-202ENST00000391942 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
ERCC2-202ENST00000391942 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
ERCC2-202ENST00000391942 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
ERCC2-202ENST00000391942 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
ERCC2-202ENST00000391942 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
ERCC2-202ENST00000391942 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
ERCC2-202ENST00000391942 MT4P47944 62 aa5.23□□□□□ -1.57
ERCC2-202ENST00000391942 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
ERCC2-202ENST00000391942 MT1AP04731 61 aa5.17□□□□□ -1.58
ERCC2-202ENST00000391942 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
ERCC2-202ENST00000391942 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
ERCC2-202ENST00000391942 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
ERCC2-202ENST00000391942 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
ERCC2-202ENST00000391942 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
ERCC2-202ENST00000391942 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
ERCC2-202ENST00000391942 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
ERCC2-202ENST00000391942 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
ERCC2-202ENST00000391942 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
ERCC2-202ENST00000391942 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
ERCC2-202ENST00000391942 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
ERCC2-202ENST00000391942 MT3P25713 68 aa4.7□□□□□ -1.66
ERCC2-202ENST00000391942 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
ERCC2-202ENST00000391942 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
ERCC2-202ENST00000391942 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
ERCC2-202ENST00000391942 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
ERCC2-202ENST00000391942 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
ERCC2-202ENST00000391942 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
ERCC2-202ENST00000391942 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
ERCC2-202ENST00000391942 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
ERCC2-202ENST00000391942 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
ERCC2-202ENST00000391942 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
ERCC2-202ENST00000391942 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
ERCC2-202ENST00000391942 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
ERCC2-202ENST00000391942 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
ERCC2-202ENST00000391942 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
ERCC2-202ENST00000391942 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
ERCC2-202ENST00000391942 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
ERCC2-202ENST00000391942 PRM1P04553 51 aa3.68□□□□□ -1.82
ERCC2-202ENST00000391942 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
ERCC2-202ENST00000391942 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
ERCC2-202ENST00000391942 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
ERCC2-202ENST00000391942 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
ERCC2-202ENST00000391942 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
ERCC2-202ENST00000391942 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
ERCC2-202ENST00000391942 PHGR1C9JFL3 82 aa2.96□□□□□ -1.93
ERCC2-202ENST00000391942 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
ERCC2-202ENST00000391942 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
ERCC2-202ENST00000391942 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms