RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 A8MU10 97 aa4.82□□□□□ -1.64
GGPS1-203ENST00000391855 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
GGPS1-203ENST00000391855 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
GGPS1-203ENST00000391855 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
GGPS1-203ENST00000391855 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
GGPS1-203ENST00000391855 UQCR11O14957 56 aa4.74□□□□□ -1.65
GGPS1-203ENST00000391855 MT1EP04732 61 aa4.72□□□□□ -1.65
GGPS1-203ENST00000391855 TNP1P09430 55 aa4.7□□□□□ -1.66
GGPS1-203ENST00000391855 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
GGPS1-203ENST00000391855 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
GGPS1-203ENST00000391855 V9GYY9 64 aa4.67□□□□□ -1.66
GGPS1-203ENST00000391855 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
GGPS1-203ENST00000391855 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
GGPS1-203ENST00000391855 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
GGPS1-203ENST00000391855 MT1GP13640 62 aa4.58□□□□□ -1.68
GGPS1-203ENST00000391855 Q1T7F1 81 aa4.58□□□□□ -1.68
GGPS1-203ENST00000391855 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
GGPS1-203ENST00000391855 K7ERS5 55 aa4.57□□□□□ -1.68
GGPS1-203ENST00000391855 PSPHP1O15172 72 aa4.55□□□□□ -1.68
GGPS1-203ENST00000391855 MT3P25713 68 aa4.54□□□□□ -1.68
GGPS1-203ENST00000391855 MT1LQ93083 61 aa4.52□□□□□ -1.69
GGPS1-203ENST00000391855 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
GGPS1-203ENST00000391855 MT1MQ8N339 61 aa4.48□□□□□ -1.69
GGPS1-203ENST00000391855 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
GGPS1-203ENST00000391855 A6NED7 52 aa4.44□□□□□ -1.7
GGPS1-203ENST00000391855 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
GGPS1-203ENST00000391855 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
GGPS1-203ENST00000391855 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
GGPS1-203ENST00000391855 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
GGPS1-203ENST00000391855 ROMO1P60602 79 aa4.23□□□□□ -1.73
GGPS1-203ENST00000391855 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
GGPS1-203ENST00000391855 MT4P47944 62 aa4.2□□□□□ -1.74
GGPS1-203ENST00000391855 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
GGPS1-203ENST00000391855 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
GGPS1-203ENST00000391855 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
GGPS1-203ENST00000391855 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
GGPS1-203ENST00000391855 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
GGPS1-203ENST00000391855 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
GGPS1-203ENST00000391855 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
GGPS1-203ENST00000391855 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
GGPS1-203ENST00000391855 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
GGPS1-203ENST00000391855 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
GGPS1-203ENST00000391855 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
GGPS1-203ENST00000391855 NDUFAF8A1L188 74 aa4□□□□□ -1.77
GGPS1-203ENST00000391855 PRAC1Q96KF2 57 aa4□□□□□ -1.77
GGPS1-203ENST00000391855 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
GGPS1-203ENST00000391855 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
GGPS1-203ENST00000391855 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
GGPS1-203ENST00000391855 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
GGPS1-203ENST00000391855 MT1AP04731 61 aa3.87□□□□□ -1.79
GGPS1-203ENST00000391855 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
GGPS1-203ENST00000391855 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
GGPS1-203ENST00000391855 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
GGPS1-203ENST00000391855 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
GGPS1-203ENST00000391855 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
GGPS1-203ENST00000391855 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
GGPS1-203ENST00000391855 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
GGPS1-203ENST00000391855 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
GGPS1-203ENST00000391855 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
GGPS1-203ENST00000391855 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
GGPS1-203ENST00000391855 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
GGPS1-203ENST00000391855 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
GGPS1-203ENST00000391855 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
GGPS1-203ENST00000391855 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
GGPS1-203ENST00000391855 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
GGPS1-203ENST00000391855 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
GGPS1-203ENST00000391855 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
GGPS1-203ENST00000391855 LCE1CQ5T751 118 aa3□□□□□ -1.93
GGPS1-203ENST00000391855 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
GGPS1-203ENST00000391855 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
GGPS1-203ENST00000391855 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
GGPS1-203ENST00000391855 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
GGPS1-203ENST00000391855 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
GGPS1-203ENST00000391855 PRM1P04553 51 aa2.15□□□□□ -2.07
GGPS1-203ENST00000391855 INE1O15225 51 aa2□□□□□ -2.09
GGPS1-203ENST00000391855 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
GGPS1-203ENST00000391855 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 76.8 ms