RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 C20orf197Q8N268 126 aa2.28□□□□□ -2.04
TRAV13-1-201ENST00000390436 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
TRAV13-1-201ENST00000390436 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
TRAV13-1-201ENST00000390436 A0A0D9SG42 100 aa2.26□□□□□ -2.05
TRAV13-1-201ENST00000390436 ATOX1O00244 68 aa2.26□□□□□ -2.05
TRAV13-1-201ENST00000390436 MT-ATP8P03928 68 aa2.26□□□□□ -2.05
TRAV13-1-201ENST00000390436 HIST1H4AP62805 103 aaKnown RBP2.26□□□□□ -2.05
TRAV13-1-201ENST00000390436 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
TRAV13-1-201ENST00000390436 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
TRAV13-1-201ENST00000390436 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
TRAV13-1-201ENST00000390436 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
TRAV13-1-201ENST00000390436 RPS28P62857 69 aaKnown RBP2.2□□□□□ -2.06
TRAV13-1-201ENST00000390436 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
TRAV13-1-201ENST00000390436 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
TRAV13-1-201ENST00000390436 F8W1H4 67 aa2.18□□□□□ -2.06
TRAV13-1-201ENST00000390436 ANAPC13Q9BS18 74 aa2.18□□□□□ -2.06
TRAV13-1-201ENST00000390436 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
TRAV13-1-201ENST00000390436 J3QR89 54 aa2.16□□□□□ -2.06
TRAV13-1-201ENST00000390436 MP68P56378 58 aa2.16□□□□□ -2.06
TRAV13-1-201ENST00000390436 TRAV7A0A075B6U4 112 aa2.15□□□□□ -2.07
TRAV13-1-201ENST00000390436 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
TRAV13-1-201ENST00000390436 GTF2H5Q6ZYL4 71 aa2.15□□□□□ -2.07
TRAV13-1-201ENST00000390436 PSPHP1O15172 72 aa2.13□□□□□ -2.07
TRAV13-1-201ENST00000390436 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
TRAV13-1-201ENST00000390436 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
TRAV13-1-201ENST00000390436 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
TRAV13-1-201ENST00000390436 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
TRAV13-1-201ENST00000390436 LINC00643Q86TS7 51 aa2.11□□□□□ -2.07
TRAV13-1-201ENST00000390436 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
TRAV13-1-201ENST00000390436 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TRAV13-1-201ENST00000390436 H3BPC8 53 aa2.1□□□□□ -2.07
TRAV13-1-201ENST00000390436 ACYP2P14621 99 aa2.1□□□□□ -2.07
TRAV13-1-201ENST00000390436 CCDC179H3BU77 68 aa2.09□□□□□ -2.07
TRAV13-1-201ENST00000390436 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
TRAV13-1-201ENST00000390436 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
TRAV13-1-201ENST00000390436 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
TRAV13-1-201ENST00000390436 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
TRAV13-1-201ENST00000390436 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
TRAV13-1-201ENST00000390436 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
TRAV13-1-201ENST00000390436 TMEM258P61165 79 aa2.05□□□□□ -2.08
TRAV13-1-201ENST00000390436 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
TRAV13-1-201ENST00000390436 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
TRAV13-1-201ENST00000390436 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
TRAV13-1-201ENST00000390436 SPTSSBQ8NFR3 76 aa2.02□□□□□ -2.09
TRAV13-1-201ENST00000390436 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
TRAV13-1-201ENST00000390436 LCE1CQ5T751 118 aa2□□□□□ -2.09
TRAV13-1-201ENST00000390436 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
TRAV13-1-201ENST00000390436 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
TRAV13-1-201ENST00000390436 SERP1Q9Y6X1 66 aa1.99□□□□□ -2.09
TRAV13-1-201ENST00000390436 A0A1B0GU33 70 aa1.96□□□□□ -2.1
TRAV13-1-201ENST00000390436 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
TRAV13-1-201ENST00000390436 COA5Q86WW8 74 aa1.96□□□□□ -2.1
TRAV13-1-201ENST00000390436 TNP1P09430 55 aa1.95□□□□□ -2.1
TRAV13-1-201ENST00000390436 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
TRAV13-1-201ENST00000390436 K7ERS5 55 aa1.94□□□□□ -2.1
TRAV13-1-201ENST00000390436 MT1AP04731 61 aa1.94□□□□□ -2.1
TRAV13-1-201ENST00000390436 COX7CP15954 63 aa1.94□□□□□ -2.1
TRAV13-1-201ENST00000390436 A6NED7 52 aa1.93□□□□□ -2.1
TRAV13-1-201ENST00000390436 ATP5EP56381 51 aaPredicted RBP1.91□□□□□ -2.1
TRAV13-1-201ENST00000390436 SERP2Q8N6R1 65 aa1.85□□□□□ -2.11
TRAV13-1-201ENST00000390436 Q1T7F1 81 aa1.83□□□□□ -2.12
TRAV13-1-201ENST00000390436 ROMO1P60602 79 aa1.82□□□□□ -2.12
TRAV13-1-201ENST00000390436 H7BZZ5 65 aa1.78□□□□□ -2.12
TRAV13-1-201ENST00000390436 A0A1B0GU69 56 aa1.77□□□□□ -2.13
TRAV13-1-201ENST00000390436 KRTAP25-1Q3LHN0 102 aa1.77□□□□□ -2.13
TRAV13-1-201ENST00000390436 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
TRAV13-1-201ENST00000390436 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
TRAV13-1-201ENST00000390436 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
TRAV13-1-201ENST00000390436 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
TRAV13-1-201ENST00000390436 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
TRAV13-1-201ENST00000390436 UQCR11O14957 56 aa1.58□□□□□ -2.16
TRAV13-1-201ENST00000390436 INE1O15225 51 aa1.48□□□□□ -2.17
TRAV13-1-201ENST00000390436 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
TRAV13-1-201ENST00000390436 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
TRAV13-1-201ENST00000390436 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
TRAV13-1-201ENST00000390436 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
TRAV13-1-201ENST00000390436 PRM1P04553 51 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 65 ms