RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
RNF216-201ENST00000389900 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
RNF216-201ENST00000389900 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
RNF216-201ENST00000389900 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
RNF216-201ENST00000389900 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
RNF216-201ENST00000389900 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
RNF216-201ENST00000389900 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
RNF216-201ENST00000389900 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
RNF216-201ENST00000389900 NEBP20929 6669 aa3.16□□□□□ -1.9
RNF216-201ENST00000389900 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
RNF216-201ENST00000389900 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
RNF216-201ENST00000389900 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
RNF216-201ENST00000389900 KMT2DO14686 5537 aa3.09□□□□□ -1.92
RNF216-201ENST00000389900 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
RNF216-201ENST00000389900 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
RNF216-201ENST00000389900 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
RNF216-201ENST00000389900 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
RNF216-201ENST00000389900 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
RNF216-201ENST00000389900 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
RNF216-201ENST00000389900 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
RNF216-201ENST00000389900 PRM1P04553 51 aa2.94□□□□□ -1.94
RNF216-201ENST00000389900 MT1EP04732 61 aa2.9□□□□□ -1.95
RNF216-201ENST00000389900 MT1LQ93083 61 aa2.89□□□□□ -1.95
RNF216-201ENST00000389900 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
RNF216-201ENST00000389900 SPRR2EP22531 72 aa2.86□□□□□ -1.95
RNF216-201ENST00000389900 SPRR2BP35325 72 aa2.86□□□□□ -1.95
RNF216-201ENST00000389900 SPRR2AP35326 72 aa2.86□□□□□ -1.95
RNF216-201ENST00000389900 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
RNF216-201ENST00000389900 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
RNF216-201ENST00000389900 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
RNF216-201ENST00000389900 MT1GP13640 62 aa2.77□□□□□ -1.97
RNF216-201ENST00000389900 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
RNF216-201ENST00000389900 SPRR2DP22532 72 aa2.77□□□□□ -1.97
RNF216-201ENST00000389900 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
RNF216-201ENST00000389900 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
RNF216-201ENST00000389900 MT1MQ8N339 61 aa2.72□□□□□ -1.97
RNF216-201ENST00000389900 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
RNF216-201ENST00000389900 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
RNF216-201ENST00000389900 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
RNF216-201ENST00000389900 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
RNF216-201ENST00000389900 MT3P25713 68 aa2.68□□□□□ -1.98
RNF216-201ENST00000389900 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
RNF216-201ENST00000389900 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
RNF216-201ENST00000389900 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
RNF216-201ENST00000389900 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
RNF216-201ENST00000389900 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
RNF216-201ENST00000389900 MT1AP04731 61 aa2.54□□□□□ -2
RNF216-201ENST00000389900 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
RNF216-201ENST00000389900 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2.01
RNF216-201ENST00000389900 MT4P47944 62 aa2.46□□□□□ -2.02
RNF216-201ENST00000389900 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
RNF216-201ENST00000389900 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
RNF216-201ENST00000389900 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
RNF216-201ENST00000389900 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
RNF216-201ENST00000389900 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
RNF216-201ENST00000389900 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
RNF216-201ENST00000389900 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
RNF216-201ENST00000389900 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RNF216-201ENST00000389900 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
RNF216-201ENST00000389900 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
RNF216-201ENST00000389900 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
RNF216-201ENST00000389900 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
RNF216-201ENST00000389900 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
RNF216-201ENST00000389900 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
RNF216-201ENST00000389900 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
RNF216-201ENST00000389900 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
RNF216-201ENST00000389900 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
RNF216-201ENST00000389900 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
RNF216-201ENST00000389900 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
RNF216-201ENST00000389900 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
RNF216-201ENST00000389900 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
RNF216-201ENST00000389900 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
RNF216-201ENST00000389900 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
RNF216-201ENST00000389900 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
RNF216-201ENST00000389900 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
RNF216-201ENST00000389900 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
RNF216-201ENST00000389900 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
RNF216-201ENST00000389900 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms