RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 MT1LQ93083 61 aa7.14□□□□□ -1.27
MSLN-201ENST00000382862 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
MSLN-201ENST00000382862 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
MSLN-201ENST00000382862 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
MSLN-201ENST00000382862 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
MSLN-201ENST00000382862 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
MSLN-201ENST00000382862 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
MSLN-201ENST00000382862 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
MSLN-201ENST00000382862 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
MSLN-201ENST00000382862 MT1MQ8N339 61 aa6.86□□□□□ -1.31
MSLN-201ENST00000382862 MT1GP13640 62 aa6.85□□□□□ -1.31
MSLN-201ENST00000382862 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
MSLN-201ENST00000382862 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
MSLN-201ENST00000382862 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
MSLN-201ENST00000382862 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
MSLN-201ENST00000382862 SPRR2EP22531 72 aa6.76□□□□□ -1.33
MSLN-201ENST00000382862 SPRR2BP35325 72 aa6.76□□□□□ -1.33
MSLN-201ENST00000382862 SPRR2AP35326 72 aa6.76□□□□□ -1.33
MSLN-201ENST00000382862 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
MSLN-201ENST00000382862 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
MSLN-201ENST00000382862 INE1O15225 51 aa6.62□□□□□ -1.35
MSLN-201ENST00000382862 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
MSLN-201ENST00000382862 NEBP20929 6669 aa6.6□□□□□ -1.35
MSLN-201ENST00000382862 SPRR2DP22532 72 aa6.5□□□□□ -1.37
MSLN-201ENST00000382862 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
MSLN-201ENST00000382862 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
MSLN-201ENST00000382862 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
MSLN-201ENST00000382862 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
MSLN-201ENST00000382862 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
MSLN-201ENST00000382862 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
MSLN-201ENST00000382862 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
MSLN-201ENST00000382862 MT1AP04731 61 aa6.02□□□□□ -1.45
MSLN-201ENST00000382862 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.47
MSLN-201ENST00000382862 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
MSLN-201ENST00000382862 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
MSLN-201ENST00000382862 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
MSLN-201ENST00000382862 MT4P47944 62 aa5.71□□□□□ -1.5
MSLN-201ENST00000382862 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
MSLN-201ENST00000382862 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
MSLN-201ENST00000382862 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
MSLN-201ENST00000382862 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
MSLN-201ENST00000382862 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
MSLN-201ENST00000382862 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
MSLN-201ENST00000382862 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
MSLN-201ENST00000382862 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
MSLN-201ENST00000382862 MT3P25713 68 aa5.41□□□□□ -1.54
MSLN-201ENST00000382862 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
MSLN-201ENST00000382862 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
MSLN-201ENST00000382862 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
MSLN-201ENST00000382862 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
MSLN-201ENST00000382862 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
MSLN-201ENST00000382862 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
MSLN-201ENST00000382862 PRM1P04553 51 aa4.81□□□□□ -1.64
MSLN-201ENST00000382862 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
MSLN-201ENST00000382862 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
MSLN-201ENST00000382862 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
MSLN-201ENST00000382862 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
MSLN-201ENST00000382862 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
MSLN-201ENST00000382862 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
MSLN-201ENST00000382862 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
MSLN-201ENST00000382862 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
MSLN-201ENST00000382862 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
MSLN-201ENST00000382862 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.7
MSLN-201ENST00000382862 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
MSLN-201ENST00000382862 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
MSLN-201ENST00000382862 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
MSLN-201ENST00000382862 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
MSLN-201ENST00000382862 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
MSLN-201ENST00000382862 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
MSLN-201ENST00000382862 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
MSLN-201ENST00000382862 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
MSLN-201ENST00000382862 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
MSLN-201ENST00000382862 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
MSLN-201ENST00000382862 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
MSLN-201ENST00000382862 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
MSLN-201ENST00000382862 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
MSLN-201ENST00000382862 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 101.8 ms