RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 USH2AO75445 5202 aa6.23□□□□□ -1.41
LOH12CR2-201ENST00000381800 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
LOH12CR2-201ENST00000381800 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
LOH12CR2-201ENST00000381800 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
LOH12CR2-201ENST00000381800 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
LOH12CR2-201ENST00000381800 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
LOH12CR2-201ENST00000381800 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
LOH12CR2-201ENST00000381800 KRTAP19-7Q3SYF9 63 aa5.92□□□□□ -1.46
LOH12CR2-201ENST00000381800 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
LOH12CR2-201ENST00000381800 MT1EP04732 61 aa5.79□□□□□ -1.48
LOH12CR2-201ENST00000381800 KMT2DO14686 5537 aa5.74□□□□□ -1.49
LOH12CR2-201ENST00000381800 MT1LQ93083 61 aa5.73□□□□□ -1.49
LOH12CR2-201ENST00000381800 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
LOH12CR2-201ENST00000381800 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.66□□□□□ -1.5
LOH12CR2-201ENST00000381800 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
LOH12CR2-201ENST00000381800 MT1GP13640 62 aa5.52□□□□□ -1.53
LOH12CR2-201ENST00000381800 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
LOH12CR2-201ENST00000381800 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
LOH12CR2-201ENST00000381800 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
LOH12CR2-201ENST00000381800 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
LOH12CR2-201ENST00000381800 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
LOH12CR2-201ENST00000381800 MT1MQ8N339 61 aa5.43□□□□□ -1.54
LOH12CR2-201ENST00000381800 INE1O15225 51 aa5.43□□□□□ -1.54
LOH12CR2-201ENST00000381800 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
LOH12CR2-201ENST00000381800 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
LOH12CR2-201ENST00000381800 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
LOH12CR2-201ENST00000381800 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
LOH12CR2-201ENST00000381800 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
LOH12CR2-201ENST00000381800 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
LOH12CR2-201ENST00000381800 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
LOH12CR2-201ENST00000381800 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
LOH12CR2-201ENST00000381800 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
LOH12CR2-201ENST00000381800 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
LOH12CR2-201ENST00000381800 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
LOH12CR2-201ENST00000381800 SPRR2EP22531 72 aa5.07□□□□□ -1.6
LOH12CR2-201ENST00000381800 SPRR2BP35325 72 aa5.07□□□□□ -1.6
LOH12CR2-201ENST00000381800 SPRR2AP35326 72 aa5.07□□□□□ -1.6
LOH12CR2-201ENST00000381800 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
LOH12CR2-201ENST00000381800 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
LOH12CR2-201ENST00000381800 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
LOH12CR2-201ENST00000381800 MT1AP04731 61 aa4.89□□□□□ -1.63
LOH12CR2-201ENST00000381800 SPRR2DP22532 72 aa4.88□□□□□ -1.63
LOH12CR2-201ENST00000381800 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
LOH12CR2-201ENST00000381800 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
LOH12CR2-201ENST00000381800 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
LOH12CR2-201ENST00000381800 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
LOH12CR2-201ENST00000381800 KRTAP4-4Q9BYR3 166 aa4.71□□□□□ -1.66
LOH12CR2-201ENST00000381800 NEBP20929 6669 aa4.63□□□□□ -1.67
LOH12CR2-201ENST00000381800 MT3P25713 68 aa4.6□□□□□ -1.67
LOH12CR2-201ENST00000381800 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
LOH12CR2-201ENST00000381800 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
LOH12CR2-201ENST00000381800 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
LOH12CR2-201ENST00000381800 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
LOH12CR2-201ENST00000381800 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
LOH12CR2-201ENST00000381800 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
LOH12CR2-201ENST00000381800 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
LOH12CR2-201ENST00000381800 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
LOH12CR2-201ENST00000381800 MT4P47944 62 aa4.17□□□□□ -1.74
LOH12CR2-201ENST00000381800 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
LOH12CR2-201ENST00000381800 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
LOH12CR2-201ENST00000381800 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
LOH12CR2-201ENST00000381800 PRM1P04553 51 aa3.88□□□□□ -1.79
LOH12CR2-201ENST00000381800 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
LOH12CR2-201ENST00000381800 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
LOH12CR2-201ENST00000381800 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
LOH12CR2-201ENST00000381800 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
LOH12CR2-201ENST00000381800 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
LOH12CR2-201ENST00000381800 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
LOH12CR2-201ENST00000381800 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
LOH12CR2-201ENST00000381800 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
LOH12CR2-201ENST00000381800 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
LOH12CR2-201ENST00000381800 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
LOH12CR2-201ENST00000381800 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
LOH12CR2-201ENST00000381800 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
LOH12CR2-201ENST00000381800 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
LOH12CR2-201ENST00000381800 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
LOH12CR2-201ENST00000381800 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 1017.8 ms