RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
NEDD9-202ENST00000379446 HMCN2Q8NDA2 5059 aa2.45□□□□□ -2.02
NEDD9-202ENST00000379446 KMT2DO14686 5537 aa2.44□□□□□ -2.02
NEDD9-202ENST00000379446 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
NEDD9-202ENST00000379446 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
NEDD9-202ENST00000379446 KRTAP4-8Q9BYQ9 185 aa2.44□□□□□ -2.02
NEDD9-202ENST00000379446 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
NEDD9-202ENST00000379446 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
NEDD9-202ENST00000379446 MT1BP07438 61 aa2.41□□□□□ -2.02
NEDD9-202ENST00000379446 MT1XP80297 61 aa2.4□□□□□ -2.03
NEDD9-202ENST00000379446 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
NEDD9-202ENST00000379446 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
NEDD9-202ENST00000379446 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
NEDD9-202ENST00000379446 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
NEDD9-202ENST00000379446 MT1GP13640 62 aa2.35□□□□□ -2.03
NEDD9-202ENST00000379446 NEBP20929 6669 aa2.31□□□□□ -2.04
NEDD9-202ENST00000379446 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
NEDD9-202ENST00000379446 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
NEDD9-202ENST00000379446 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
NEDD9-202ENST00000379446 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.04
NEDD9-202ENST00000379446 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
NEDD9-202ENST00000379446 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
NEDD9-202ENST00000379446 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
NEDD9-202ENST00000379446 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
NEDD9-202ENST00000379446 USH2AO75445 5202 aa2.26□□□□□ -2.05
NEDD9-202ENST00000379446 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
NEDD9-202ENST00000379446 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
NEDD9-202ENST00000379446 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
NEDD9-202ENST00000379446 MT1EP04732 61 aa2.15□□□□□ -2.07
NEDD9-202ENST00000379446 LCE1AQ5T7P2 110 aa2.14□□□□□ -2.07
NEDD9-202ENST00000379446 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
NEDD9-202ENST00000379446 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
NEDD9-202ENST00000379446 MT1MQ8N339 61 aa2.13□□□□□ -2.07
NEDD9-202ENST00000379446 LCE4AQ5TA78 99 aa2.12□□□□□ -2.07
NEDD9-202ENST00000379446 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
NEDD9-202ENST00000379446 MT1LQ93083 61 aa2.11□□□□□ -2.07
NEDD9-202ENST00000379446 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
NEDD9-202ENST00000379446 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.07
NEDD9-202ENST00000379446 SSPOA2VEC9 5147 aa2.03□□□□□ -2.09
NEDD9-202ENST00000379446 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
NEDD9-202ENST00000379446 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
NEDD9-202ENST00000379446 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
NEDD9-202ENST00000379446 KRTAP9-9Q9BYP9 154 aa1.96□□□□□ -2.1
NEDD9-202ENST00000379446 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
NEDD9-202ENST00000379446 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
NEDD9-202ENST00000379446 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
NEDD9-202ENST00000379446 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
NEDD9-202ENST00000379446 PRM1P04553 51 aa1.92□□□□□ -2.1
NEDD9-202ENST00000379446 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
NEDD9-202ENST00000379446 MT1AP04731 61 aa1.9□□□□□ -2.11
NEDD9-202ENST00000379446 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
NEDD9-202ENST00000379446 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
NEDD9-202ENST00000379446 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
NEDD9-202ENST00000379446 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
NEDD9-202ENST00000379446 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
NEDD9-202ENST00000379446 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
NEDD9-202ENST00000379446 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
NEDD9-202ENST00000379446 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
NEDD9-202ENST00000379446 KRTAP4-11Q9BYQ6 195 aa1.67□□□□□ -2.14
NEDD9-202ENST00000379446 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
NEDD9-202ENST00000379446 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
NEDD9-202ENST00000379446 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
NEDD9-202ENST00000379446 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.16
NEDD9-202ENST00000379446 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
NEDD9-202ENST00000379446 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
NEDD9-202ENST00000379446 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
NEDD9-202ENST00000379446 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
NEDD9-202ENST00000379446 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
NEDD9-202ENST00000379446 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
NEDD9-202ENST00000379446 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
NEDD9-202ENST00000379446 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
NEDD9-202ENST00000379446 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
NEDD9-202ENST00000379446 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
NEDD9-202ENST00000379446 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
NEDD9-202ENST00000379446 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
NEDD9-202ENST00000379446 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
NEDD9-202ENST00000379446 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 103.4 ms