RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SPRR2EP22531 72 aa4.44□□□□□ -1.7
DEPDC4-202ENST00000378244 SPRR2BP35325 72 aa4.44□□□□□ -1.7
DEPDC4-202ENST00000378244 SPRR2AP35326 72 aa4.44□□□□□ -1.7
DEPDC4-202ENST00000378244 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
DEPDC4-202ENST00000378244 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
DEPDC4-202ENST00000378244 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
DEPDC4-202ENST00000378244 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
DEPDC4-202ENST00000378244 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
DEPDC4-202ENST00000378244 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
DEPDC4-202ENST00000378244 MT1EP04732 61 aa4.33□□□□□ -1.72
DEPDC4-202ENST00000378244 SPRR2DP22532 72 aa4.28□□□□□ -1.72
DEPDC4-202ENST00000378244 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
DEPDC4-202ENST00000378244 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-202ENST00000378244 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
DEPDC4-202ENST00000378244 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
DEPDC4-202ENST00000378244 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
DEPDC4-202ENST00000378244 INE1O15225 51 aa4.2□□□□□ -1.74
DEPDC4-202ENST00000378244 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
DEPDC4-202ENST00000378244 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
DEPDC4-202ENST00000378244 MT1LQ93083 61 aa4.18□□□□□ -1.74
DEPDC4-202ENST00000378244 MT1GP13640 62 aa4.16□□□□□ -1.74
DEPDC4-202ENST00000378244 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
DEPDC4-202ENST00000378244 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
DEPDC4-202ENST00000378244 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
DEPDC4-202ENST00000378244 MT1MQ8N339 61 aa4.1□□□□□ -1.75
DEPDC4-202ENST00000378244 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
DEPDC4-202ENST00000378244 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
DEPDC4-202ENST00000378244 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
DEPDC4-202ENST00000378244 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
DEPDC4-202ENST00000378244 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
DEPDC4-202ENST00000378244 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
DEPDC4-202ENST00000378244 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
DEPDC4-202ENST00000378244 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
DEPDC4-202ENST00000378244 MT4P47944 62 aa3.78□□□□□ -1.8
DEPDC4-202ENST00000378244 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
DEPDC4-202ENST00000378244 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
DEPDC4-202ENST00000378244 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
DEPDC4-202ENST00000378244 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
DEPDC4-202ENST00000378244 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
DEPDC4-202ENST00000378244 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
DEPDC4-202ENST00000378244 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
DEPDC4-202ENST00000378244 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
DEPDC4-202ENST00000378244 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
DEPDC4-202ENST00000378244 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
DEPDC4-202ENST00000378244 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
DEPDC4-202ENST00000378244 MT1AP04731 61 aa3.54□□□□□ -1.84
DEPDC4-202ENST00000378244 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
DEPDC4-202ENST00000378244 MT3P25713 68 aa3.5□□□□□ -1.85
DEPDC4-202ENST00000378244 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
DEPDC4-202ENST00000378244 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
DEPDC4-202ENST00000378244 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
DEPDC4-202ENST00000378244 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
DEPDC4-202ENST00000378244 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
DEPDC4-202ENST00000378244 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
DEPDC4-202ENST00000378244 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
DEPDC4-202ENST00000378244 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
DEPDC4-202ENST00000378244 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
DEPDC4-202ENST00000378244 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
DEPDC4-202ENST00000378244 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
DEPDC4-202ENST00000378244 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
DEPDC4-202ENST00000378244 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
DEPDC4-202ENST00000378244 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
DEPDC4-202ENST00000378244 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
DEPDC4-202ENST00000378244 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
DEPDC4-202ENST00000378244 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
DEPDC4-202ENST00000378244 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
DEPDC4-202ENST00000378244 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
DEPDC4-202ENST00000378244 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
DEPDC4-202ENST00000378244 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
DEPDC4-202ENST00000378244 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
DEPDC4-202ENST00000378244 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
DEPDC4-202ENST00000378244 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
DEPDC4-202ENST00000378244 PRM1P04553 51 aa2.22□□□□□ -2.05
DEPDC4-202ENST00000378244 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
DEPDC4-202ENST00000378244 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
DEPDC4-202ENST00000378244 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
DEPDC4-202ENST00000378244 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
DEPDC4-202ENST00000378244 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 114.2 ms