RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
RNF38-205ENST00000377877 SPRR2FQ96RM1 72 aa7.66□□□□□ -1.18
RNF38-205ENST00000377877 KRTAP6-3Q3LI67 103 aa7.61□□□□□ -1.19
RNF38-205ENST00000377877 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
RNF38-205ENST00000377877 MT1LQ93083 61 aa7.5□□□□□ -1.21
RNF38-205ENST00000377877 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
RNF38-205ENST00000377877 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
RNF38-205ENST00000377877 LCE1AQ5T7P2 110 aa7.35□□□□□ -1.23
RNF38-205ENST00000377877 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
RNF38-205ENST00000377877 MT1GP13640 62 aa7.31□□□□□ -1.24
RNF38-205ENST00000377877 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
RNF38-205ENST00000377877 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
RNF38-205ENST00000377877 SPRR2EP22531 72 aa7.29□□□□□ -1.24
RNF38-205ENST00000377877 SPRR2BP35325 72 aa7.29□□□□□ -1.24
RNF38-205ENST00000377877 SPRR2AP35326 72 aa7.29□□□□□ -1.24
RNF38-205ENST00000377877 MT1MQ8N339 61 aa7.24□□□□□ -1.25
RNF38-205ENST00000377877 INE1O15225 51 aa7.24□□□□□ -1.25
RNF38-205ENST00000377877 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
RNF38-205ENST00000377877 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
RNF38-205ENST00000377877 NEBP20929 6669 aa7.15□□□□□ -1.27
RNF38-205ENST00000377877 DSTQ03001 7570 aaKnown RBP7.08□□□□□ -1.28
RNF38-205ENST00000377877 SPRR2DP22532 72 aa7.02□□□□□ -1.29
RNF38-205ENST00000377877 KRTAP9-6A8MVA2 160 aa6.98□□□□□ -1.29
RNF38-205ENST00000377877 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
RNF38-205ENST00000377877 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
RNF38-205ENST00000377877 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
RNF38-205ENST00000377877 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
RNF38-205ENST00000377877 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
RNF38-205ENST00000377877 KRTAP2-1Q9BYU5 128 aa6.75□□□□□ -1.33
RNF38-205ENST00000377877 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
RNF38-205ENST00000377877 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
RNF38-205ENST00000377877 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
RNF38-205ENST00000377877 MT1AP04731 61 aa6.35□□□□□ -1.39
RNF38-205ENST00000377877 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
RNF38-205ENST00000377877 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
RNF38-205ENST00000377877 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
RNF38-205ENST00000377877 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
RNF38-205ENST00000377877 MT4P47944 62 aa6.15□□□□□ -1.43
RNF38-205ENST00000377877 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
RNF38-205ENST00000377877 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
RNF38-205ENST00000377877 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
RNF38-205ENST00000377877 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
RNF38-205ENST00000377877 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
RNF38-205ENST00000377877 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
RNF38-205ENST00000377877 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
RNF38-205ENST00000377877 MT3P25713 68 aa5.75□□□□□ -1.49
RNF38-205ENST00000377877 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
RNF38-205ENST00000377877 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
RNF38-205ENST00000377877 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
RNF38-205ENST00000377877 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
RNF38-205ENST00000377877 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
RNF38-205ENST00000377877 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
RNF38-205ENST00000377877 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
RNF38-205ENST00000377877 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
RNF38-205ENST00000377877 PRM1P04553 51 aa5.24□□□□□ -1.57
RNF38-205ENST00000377877 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
RNF38-205ENST00000377877 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
RNF38-205ENST00000377877 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
RNF38-205ENST00000377877 KRTAP5-8O75690 187 aa5□□□□□ -1.61
RNF38-205ENST00000377877 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
RNF38-205ENST00000377877 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
RNF38-205ENST00000377877 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
RNF38-205ENST00000377877 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
RNF38-205ENST00000377877 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
RNF38-205ENST00000377877 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
RNF38-205ENST00000377877 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
RNF38-205ENST00000377877 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
RNF38-205ENST00000377877 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
RNF38-205ENST00000377877 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
RNF38-205ENST00000377877 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
RNF38-205ENST00000377877 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
RNF38-205ENST00000377877 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
RNF38-205ENST00000377877 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
RNF38-205ENST00000377877 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
RNF38-205ENST00000377877 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
RNF38-205ENST00000377877 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
RNF38-205ENST00000377877 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 253 ms