RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
CBWD3-204ENST00000377349 A8MU10 97 aa7.01□□□□□ -1.29
CBWD3-204ENST00000377349 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
CBWD3-204ENST00000377349 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
CBWD3-204ENST00000377349 AHNAK2Q8IVF2 5795 aa6.96□□□□□ -1.3
CBWD3-204ENST00000377349 MT1GP13640 62 aa6.93□□□□□ -1.3
CBWD3-204ENST00000377349 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
CBWD3-204ENST00000377349 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
CBWD3-204ENST00000377349 MT4P47944 62 aa6.87□□□□□ -1.31
CBWD3-204ENST00000377349 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
CBWD3-204ENST00000377349 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
CBWD3-204ENST00000377349 MT1MQ8N339 61 aa6.84□□□□□ -1.31
CBWD3-204ENST00000377349 TNP1P09430 55 aa6.82□□□□□ -1.32
CBWD3-204ENST00000377349 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
CBWD3-204ENST00000377349 MT1LQ93083 61 aa6.79□□□□□ -1.32
CBWD3-204ENST00000377349 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
CBWD3-204ENST00000377349 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
CBWD3-204ENST00000377349 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
CBWD3-204ENST00000377349 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
CBWD3-204ENST00000377349 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
CBWD3-204ENST00000377349 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
CBWD3-204ENST00000377349 UQCR11O14957 56 aa6.59□□□□□ -1.36
CBWD3-204ENST00000377349 TMEM258P61165 79 aa6.58□□□□□ -1.36
CBWD3-204ENST00000377349 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CBWD3-204ENST00000377349 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
CBWD3-204ENST00000377349 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
CBWD3-204ENST00000377349 K7ERS5 55 aa6.38□□□□□ -1.39
CBWD3-204ENST00000377349 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
CBWD3-204ENST00000377349 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
CBWD3-204ENST00000377349 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
CBWD3-204ENST00000377349 PSPHP1O15172 72 aa6.33□□□□□ -1.4
CBWD3-204ENST00000377349 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
CBWD3-204ENST00000377349 V9GYY9 64 aa6.24□□□□□ -1.41
CBWD3-204ENST00000377349 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
CBWD3-204ENST00000377349 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
CBWD3-204ENST00000377349 Q1T7F1 81 aa6.16□□□□□ -1.42
CBWD3-204ENST00000377349 A6NED7 52 aa6.11□□□□□ -1.43
CBWD3-204ENST00000377349 PCP4P48539 62 aa6.08□□□□□ -1.44
CBWD3-204ENST00000377349 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
CBWD3-204ENST00000377349 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
CBWD3-204ENST00000377349 ROMO1P60602 79 aa5.89□□□□□ -1.47
CBWD3-204ENST00000377349 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
CBWD3-204ENST00000377349 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
CBWD3-204ENST00000377349 AHNAKQ09666 5890 aaKnown RBP5.81□□□□□ -1.48
CBWD3-204ENST00000377349 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
CBWD3-204ENST00000377349 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
CBWD3-204ENST00000377349 MT1AP04731 61 aa5.75□□□□□ -1.49
CBWD3-204ENST00000377349 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
CBWD3-204ENST00000377349 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
CBWD3-204ENST00000377349 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
CBWD3-204ENST00000377349 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
CBWD3-204ENST00000377349 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
CBWD3-204ENST00000377349 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
CBWD3-204ENST00000377349 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
CBWD3-204ENST00000377349 MT3P25713 68 aa5.27□□□□□ -1.57
CBWD3-204ENST00000377349 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
CBWD3-204ENST00000377349 BRK1Q8WUW1 75 aa5.15□□□□□ -1.58
CBWD3-204ENST00000377349 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
CBWD3-204ENST00000377349 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
CBWD3-204ENST00000377349 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CBWD3-204ENST00000377349 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
CBWD3-204ENST00000377349 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
CBWD3-204ENST00000377349 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
CBWD3-204ENST00000377349 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
CBWD3-204ENST00000377349 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
CBWD3-204ENST00000377349 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CBWD3-204ENST00000377349 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
CBWD3-204ENST00000377349 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
CBWD3-204ENST00000377349 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
CBWD3-204ENST00000377349 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CBWD3-204ENST00000377349 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
CBWD3-204ENST00000377349 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
CBWD3-204ENST00000377349 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
CBWD3-204ENST00000377349 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
CBWD3-204ENST00000377349 PRM1P04553 51 aa3.04□□□□□ -1.92
CBWD3-204ENST00000377349 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CBWD3-204ENST00000377349 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
CBWD3-204ENST00000377349 INE1O15225 51 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 40.4 ms