RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 KRTAP20-1Q3LI63 56 aa6.3□□□□□ -1.4
HLA-F-218ENST00000376861 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
HLA-F-218ENST00000376861 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
HLA-F-218ENST00000376861 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
HLA-F-218ENST00000376861 MT1EP04732 61 aa6.23□□□□□ -1.41
HLA-F-218ENST00000376861 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
HLA-F-218ENST00000376861 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
HLA-F-218ENST00000376861 SPRR2DP22532 72 aa6.17□□□□□ -1.42
HLA-F-218ENST00000376861 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
HLA-F-218ENST00000376861 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
HLA-F-218ENST00000376861 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
HLA-F-218ENST00000376861 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
HLA-F-218ENST00000376861 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
HLA-F-218ENST00000376861 MT1GP13640 62 aa6.04□□□□□ -1.44
HLA-F-218ENST00000376861 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
HLA-F-218ENST00000376861 MT1LQ93083 61 aa6.03□□□□□ -1.44
HLA-F-218ENST00000376861 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
HLA-F-218ENST00000376861 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
HLA-F-218ENST00000376861 MT1MQ8N339 61 aa5.91□□□□□ -1.46
HLA-F-218ENST00000376861 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
HLA-F-218ENST00000376861 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
HLA-F-218ENST00000376861 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
HLA-F-218ENST00000376861 H3BS24 57 aa5.81□□□□□ -1.48
HLA-F-218ENST00000376861 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
HLA-F-218ENST00000376861 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
HLA-F-218ENST00000376861 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
HLA-F-218ENST00000376861 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
HLA-F-218ENST00000376861 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
HLA-F-218ENST00000376861 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
HLA-F-218ENST00000376861 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
HLA-F-218ENST00000376861 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
HLA-F-218ENST00000376861 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
HLA-F-218ENST00000376861 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
HLA-F-218ENST00000376861 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
HLA-F-218ENST00000376861 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
HLA-F-218ENST00000376861 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
HLA-F-218ENST00000376861 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
HLA-F-218ENST00000376861 MT4P47944 62 aa5.36□□□□□ -1.55
HLA-F-218ENST00000376861 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
HLA-F-218ENST00000376861 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
HLA-F-218ENST00000376861 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
HLA-F-218ENST00000376861 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
HLA-F-218ENST00000376861 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
HLA-F-218ENST00000376861 MT1AP04731 61 aa5.14□□□□□ -1.59
HLA-F-218ENST00000376861 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
HLA-F-218ENST00000376861 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
HLA-F-218ENST00000376861 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
HLA-F-218ENST00000376861 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
HLA-F-218ENST00000376861 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
HLA-F-218ENST00000376861 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
HLA-F-218ENST00000376861 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
HLA-F-218ENST00000376861 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
HLA-F-218ENST00000376861 INE1O15225 51 aa4.81□□□□□ -1.64
HLA-F-218ENST00000376861 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
HLA-F-218ENST00000376861 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
HLA-F-218ENST00000376861 MT3P25713 68 aa4.72□□□□□ -1.65
HLA-F-218ENST00000376861 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
HLA-F-218ENST00000376861 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
HLA-F-218ENST00000376861 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
HLA-F-218ENST00000376861 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
HLA-F-218ENST00000376861 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
HLA-F-218ENST00000376861 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
HLA-F-218ENST00000376861 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
HLA-F-218ENST00000376861 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
HLA-F-218ENST00000376861 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
HLA-F-218ENST00000376861 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
HLA-F-218ENST00000376861 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
HLA-F-218ENST00000376861 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
HLA-F-218ENST00000376861 PRM1P04553 51 aa3.53□□□□□ -1.84
HLA-F-218ENST00000376861 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
HLA-F-218ENST00000376861 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
HLA-F-218ENST00000376861 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
HLA-F-218ENST00000376861 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
HLA-F-218ENST00000376861 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
HLA-F-218ENST00000376861 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
HLA-F-218ENST00000376861 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
HLA-F-218ENST00000376861 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 117.5 ms