RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.45
HLA-A-202ENST00000376806 MT1LQ93083 61 aa5.96□□□□□ -1.46
HLA-A-202ENST00000376806 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
HLA-A-202ENST00000376806 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
HLA-A-202ENST00000376806 KRTAP5-9P26371 169 aa5.9□□□□□ -1.47
HLA-A-202ENST00000376806 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
HLA-A-202ENST00000376806 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
HLA-A-202ENST00000376806 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
HLA-A-202ENST00000376806 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
HLA-A-202ENST00000376806 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
HLA-A-202ENST00000376806 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
HLA-A-202ENST00000376806 MT1GP13640 62 aa5.68□□□□□ -1.5
HLA-A-202ENST00000376806 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
HLA-A-202ENST00000376806 MT1MQ8N339 61 aa5.67□□□□□ -1.5
HLA-A-202ENST00000376806 SPRR2EP22531 72 aa5.64□□□□□ -1.51
HLA-A-202ENST00000376806 SPRR2BP35325 72 aa5.64□□□□□ -1.51
HLA-A-202ENST00000376806 SPRR2AP35326 72 aa5.64□□□□□ -1.51
HLA-A-202ENST00000376806 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
HLA-A-202ENST00000376806 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
HLA-A-202ENST00000376806 NEBP20929 6669 aa5.56□□□□□ -1.52
HLA-A-202ENST00000376806 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
HLA-A-202ENST00000376806 SPRR2DP22532 72 aa5.43□□□□□ -1.54
HLA-A-202ENST00000376806 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
HLA-A-202ENST00000376806 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
HLA-A-202ENST00000376806 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
HLA-A-202ENST00000376806 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
HLA-A-202ENST00000376806 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
HLA-A-202ENST00000376806 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
HLA-A-202ENST00000376806 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
HLA-A-202ENST00000376806 INE1O15225 51 aa5.13□□□□□ -1.59
HLA-A-202ENST00000376806 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
HLA-A-202ENST00000376806 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
HLA-A-202ENST00000376806 MT1AP04731 61 aa5.05□□□□□ -1.6
HLA-A-202ENST00000376806 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
HLA-A-202ENST00000376806 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
HLA-A-202ENST00000376806 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
HLA-A-202ENST00000376806 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
HLA-A-202ENST00000376806 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
HLA-A-202ENST00000376806 MT4P47944 62 aa4.77□□□□□ -1.65
HLA-A-202ENST00000376806 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
HLA-A-202ENST00000376806 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
HLA-A-202ENST00000376806 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
HLA-A-202ENST00000376806 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
HLA-A-202ENST00000376806 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
HLA-A-202ENST00000376806 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
HLA-A-202ENST00000376806 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
HLA-A-202ENST00000376806 MT3P25713 68 aa4.54□□□□□ -1.68
HLA-A-202ENST00000376806 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
HLA-A-202ENST00000376806 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
HLA-A-202ENST00000376806 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
HLA-A-202ENST00000376806 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
HLA-A-202ENST00000376806 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
HLA-A-202ENST00000376806 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
HLA-A-202ENST00000376806 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
HLA-A-202ENST00000376806 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
HLA-A-202ENST00000376806 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
HLA-A-202ENST00000376806 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HLA-A-202ENST00000376806 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
HLA-A-202ENST00000376806 PRM1P04553 51 aa4.03□□□□□ -1.77
HLA-A-202ENST00000376806 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
HLA-A-202ENST00000376806 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
HLA-A-202ENST00000376806 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HLA-A-202ENST00000376806 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
HLA-A-202ENST00000376806 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
HLA-A-202ENST00000376806 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
HLA-A-202ENST00000376806 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
HLA-A-202ENST00000376806 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
HLA-A-202ENST00000376806 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
HLA-A-202ENST00000376806 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
HLA-A-202ENST00000376806 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
HLA-A-202ENST00000376806 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
HLA-A-202ENST00000376806 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
HLA-A-202ENST00000376806 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
HLA-A-202ENST00000376806 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
HLA-A-202ENST00000376806 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
HLA-A-202ENST00000376806 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
HLA-A-202ENST00000376806 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 84.6 ms