RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
HCG9-201ENST00000376800 TNP1P09430 55 aa4.69□□□□□ -1.66
HCG9-201ENST00000376800 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
HCG9-201ENST00000376800 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
HCG9-201ENST00000376800 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
HCG9-201ENST00000376800 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
HCG9-201ENST00000376800 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
HCG9-201ENST00000376800 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
HCG9-201ENST00000376800 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
HCG9-201ENST00000376800 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
HCG9-201ENST00000376800 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
HCG9-201ENST00000376800 UQCR11O14957 56 aa4.46□□□□□ -1.7
HCG9-201ENST00000376800 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
HCG9-201ENST00000376800 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
HCG9-201ENST00000376800 TMEM258P61165 79 aa4.42□□□□□ -1.7
HCG9-201ENST00000376800 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
HCG9-201ENST00000376800 V9GYY9 64 aa4.4□□□□□ -1.71
HCG9-201ENST00000376800 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
HCG9-201ENST00000376800 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
HCG9-201ENST00000376800 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
HCG9-201ENST00000376800 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
HCG9-201ENST00000376800 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
HCG9-201ENST00000376800 PSPHP1O15172 72 aa4.29□□□□□ -1.72
HCG9-201ENST00000376800 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
HCG9-201ENST00000376800 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
HCG9-201ENST00000376800 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
HCG9-201ENST00000376800 K7ERS5 55 aa4.23□□□□□ -1.73
HCG9-201ENST00000376800 H3BS24 57 aa4.22□□□□□ -1.73
HCG9-201ENST00000376800 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
HCG9-201ENST00000376800 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
HCG9-201ENST00000376800 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
HCG9-201ENST00000376800 Q1T7F1 81 aa4.17□□□□□ -1.74
HCG9-201ENST00000376800 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
HCG9-201ENST00000376800 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
HCG9-201ENST00000376800 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
HCG9-201ENST00000376800 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
HCG9-201ENST00000376800 A6NED7 52 aa4.09□□□□□ -1.75
HCG9-201ENST00000376800 MT1AP04731 61 aa4.07□□□□□ -1.76
HCG9-201ENST00000376800 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
HCG9-201ENST00000376800 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
HCG9-201ENST00000376800 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
HCG9-201ENST00000376800 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
HCG9-201ENST00000376800 ROMO1P60602 79 aa4□□□□□ -1.77
HCG9-201ENST00000376800 PMAIP1Q13794 54 aa4□□□□□ -1.77
HCG9-201ENST00000376800 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
HCG9-201ENST00000376800 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
HCG9-201ENST00000376800 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
HCG9-201ENST00000376800 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
HCG9-201ENST00000376800 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
HCG9-201ENST00000376800 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
HCG9-201ENST00000376800 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
HCG9-201ENST00000376800 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
HCG9-201ENST00000376800 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
HCG9-201ENST00000376800 MT3P25713 68 aa3.7□□□□□ -1.82
HCG9-201ENST00000376800 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
HCG9-201ENST00000376800 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
HCG9-201ENST00000376800 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
HCG9-201ENST00000376800 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
HCG9-201ENST00000376800 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
HCG9-201ENST00000376800 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
HCG9-201ENST00000376800 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
HCG9-201ENST00000376800 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
HCG9-201ENST00000376800 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
HCG9-201ENST00000376800 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
HCG9-201ENST00000376800 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
HCG9-201ENST00000376800 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
HCG9-201ENST00000376800 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
HCG9-201ENST00000376800 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
HCG9-201ENST00000376800 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
HCG9-201ENST00000376800 INE1O15225 51 aa2.72□□□□□ -1.97
HCG9-201ENST00000376800 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
HCG9-201ENST00000376800 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
HCG9-201ENST00000376800 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
HCG9-201ENST00000376800 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
HCG9-201ENST00000376800 PRM1P04553 51 aa2.09□□□□□ -2.07
HCG9-201ENST00000376800 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
HCG9-201ENST00000376800 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 54.6 ms