RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CLCN6-206ENST00000376496 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
CLCN6-206ENST00000376496 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
CLCN6-206ENST00000376496 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
CLCN6-206ENST00000376496 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CLCN6-206ENST00000376496 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
CLCN6-206ENST00000376496 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
CLCN6-206ENST00000376496 MT1MQ8N339 61 aa4.27□□□□□ -1.73
CLCN6-206ENST00000376496 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
CLCN6-206ENST00000376496 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
CLCN6-206ENST00000376496 MT1GP13640 62 aa4.25□□□□□ -1.73
CLCN6-206ENST00000376496 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
CLCN6-206ENST00000376496 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
CLCN6-206ENST00000376496 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
CLCN6-206ENST00000376496 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
CLCN6-206ENST00000376496 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
CLCN6-206ENST00000376496 SPRR2EP22531 72 aa4.16□□□□□ -1.74
CLCN6-206ENST00000376496 SPRR2BP35325 72 aa4.16□□□□□ -1.74
CLCN6-206ENST00000376496 SPRR2AP35326 72 aa4.16□□□□□ -1.74
CLCN6-206ENST00000376496 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
CLCN6-206ENST00000376496 SPRR2DP22532 72 aa3.99□□□□□ -1.77
CLCN6-206ENST00000376496 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
CLCN6-206ENST00000376496 NEBP20929 6669 aa3.92□□□□□ -1.78
CLCN6-206ENST00000376496 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
CLCN6-206ENST00000376496 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
CLCN6-206ENST00000376496 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
CLCN6-206ENST00000376496 INE1O15225 51 aa3.86□□□□□ -1.79
CLCN6-206ENST00000376496 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
CLCN6-206ENST00000376496 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
CLCN6-206ENST00000376496 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CLCN6-206ENST00000376496 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CLCN6-206ENST00000376496 MT1AP04731 61 aa3.74□□□□□ -1.81
CLCN6-206ENST00000376496 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
CLCN6-206ENST00000376496 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
CLCN6-206ENST00000376496 MT4P47944 62 aa3.55□□□□□ -1.84
CLCN6-206ENST00000376496 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
CLCN6-206ENST00000376496 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
CLCN6-206ENST00000376496 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
CLCN6-206ENST00000376496 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
CLCN6-206ENST00000376496 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CLCN6-206ENST00000376496 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
CLCN6-206ENST00000376496 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
CLCN6-206ENST00000376496 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
CLCN6-206ENST00000376496 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
CLCN6-206ENST00000376496 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CLCN6-206ENST00000376496 MT3P25713 68 aa3.37□□□□□ -1.87
CLCN6-206ENST00000376496 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
CLCN6-206ENST00000376496 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
CLCN6-206ENST00000376496 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CLCN6-206ENST00000376496 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
CLCN6-206ENST00000376496 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
CLCN6-206ENST00000376496 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
CLCN6-206ENST00000376496 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
CLCN6-206ENST00000376496 PRM1P04553 51 aa2.96□□□□□ -1.93
CLCN6-206ENST00000376496 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
CLCN6-206ENST00000376496 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
CLCN6-206ENST00000376496 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
CLCN6-206ENST00000376496 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CLCN6-206ENST00000376496 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CLCN6-206ENST00000376496 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CLCN6-206ENST00000376496 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
CLCN6-206ENST00000376496 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
CLCN6-206ENST00000376496 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
CLCN6-206ENST00000376496 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CLCN6-206ENST00000376496 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CLCN6-206ENST00000376496 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CLCN6-206ENST00000376496 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CLCN6-206ENST00000376496 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CLCN6-206ENST00000376496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
CLCN6-206ENST00000376496 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CLCN6-206ENST00000376496 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
CLCN6-206ENST00000376496 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
CLCN6-206ENST00000376496 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CLCN6-206ENST00000376496 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
CLCN6-206ENST00000376496 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CLCN6-206ENST00000376496 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CLCN6-206ENST00000376496 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 226.3 ms