RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
CLCN6-205ENST00000376492 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
CLCN6-205ENST00000376492 ROMO1P60602 79 aa5.04□□□□□ -1.6
CLCN6-205ENST00000376492 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CLCN6-205ENST00000376492 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
CLCN6-205ENST00000376492 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
CLCN6-205ENST00000376492 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
CLCN6-205ENST00000376492 TNP1P09430 55 aa4.96□□□□□ -1.62
CLCN6-205ENST00000376492 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
CLCN6-205ENST00000376492 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
CLCN6-205ENST00000376492 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
CLCN6-205ENST00000376492 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
CLCN6-205ENST00000376492 MT1EP04732 61 aa4.91□□□□□ -1.62
CLCN6-205ENST00000376492 AHNAK2Q8IVF2 5795 aa4.89□□□□□ -1.63
CLCN6-205ENST00000376492 MT4P47944 62 aa4.88□□□□□ -1.63
CLCN6-205ENST00000376492 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
CLCN6-205ENST00000376492 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
CLCN6-205ENST00000376492 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
CLCN6-205ENST00000376492 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
CLCN6-205ENST00000376492 H3BS24 57 aa4.75□□□□□ -1.65
CLCN6-205ENST00000376492 MT1GP13640 62 aa4.74□□□□□ -1.65
CLCN6-205ENST00000376492 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
CLCN6-205ENST00000376492 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
CLCN6-205ENST00000376492 MT1MQ8N339 61 aa4.7□□□□□ -1.66
CLCN6-205ENST00000376492 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
CLCN6-205ENST00000376492 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
CLCN6-205ENST00000376492 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
CLCN6-205ENST00000376492 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
CLCN6-205ENST00000376492 MT1LQ93083 61 aa4.62□□□□□ -1.67
CLCN6-205ENST00000376492 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
CLCN6-205ENST00000376492 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
CLCN6-205ENST00000376492 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
CLCN6-205ENST00000376492 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
CLCN6-205ENST00000376492 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
CLCN6-205ENST00000376492 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
CLCN6-205ENST00000376492 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
CLCN6-205ENST00000376492 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
CLCN6-205ENST00000376492 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
CLCN6-205ENST00000376492 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
CLCN6-205ENST00000376492 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
CLCN6-205ENST00000376492 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CLCN6-205ENST00000376492 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
CLCN6-205ENST00000376492 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
CLCN6-205ENST00000376492 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
CLCN6-205ENST00000376492 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
CLCN6-205ENST00000376492 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
CLCN6-205ENST00000376492 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
CLCN6-205ENST00000376492 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
CLCN6-205ENST00000376492 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
CLCN6-205ENST00000376492 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
CLCN6-205ENST00000376492 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
CLCN6-205ENST00000376492 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
CLCN6-205ENST00000376492 MT1AP04731 61 aa3.91□□□□□ -1.78
CLCN6-205ENST00000376492 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
CLCN6-205ENST00000376492 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
CLCN6-205ENST00000376492 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CLCN6-205ENST00000376492 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CLCN6-205ENST00000376492 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CLCN6-205ENST00000376492 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
CLCN6-205ENST00000376492 MT3P25713 68 aa3.58□□□□□ -1.84
CLCN6-205ENST00000376492 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
CLCN6-205ENST00000376492 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
CLCN6-205ENST00000376492 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
CLCN6-205ENST00000376492 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
CLCN6-205ENST00000376492 INE1O15225 51 aa3.19□□□□□ -1.9
CLCN6-205ENST00000376492 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
CLCN6-205ENST00000376492 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
CLCN6-205ENST00000376492 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CLCN6-205ENST00000376492 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
CLCN6-205ENST00000376492 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
CLCN6-205ENST00000376492 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
CLCN6-205ENST00000376492 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
CLCN6-205ENST00000376492 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
CLCN6-205ENST00000376492 PRM1P04553 51 aa2.55□□□□□ -2
CLCN6-205ENST00000376492 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CLCN6-205ENST00000376492 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CLCN6-205ENST00000376492 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
CLCN6-205ENST00000376492 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms