RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
CLCN6-204ENST00000376491 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CLCN6-204ENST00000376491 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
CLCN6-204ENST00000376491 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
CLCN6-204ENST00000376491 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
CLCN6-204ENST00000376491 SERP2Q8N6R1 65 aa5.22□□□□□ -1.57
CLCN6-204ENST00000376491 A0A1B0GU33 70 aa5.21□□□□□ -1.58
CLCN6-204ENST00000376491 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
CLCN6-204ENST00000376491 KRTAP4-6Q9BYQ5 205 aa5.21□□□□□ -1.58
CLCN6-204ENST00000376491 COX7CP15954 63 aa5.2□□□□□ -1.58
CLCN6-204ENST00000376491 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
CLCN6-204ENST00000376491 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
CLCN6-204ENST00000376491 PSPHP1O15172 72 aa5.15□□□□□ -1.59
CLCN6-204ENST00000376491 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
CLCN6-204ENST00000376491 A8MU10 97 aa5.07□□□□□ -1.6
CLCN6-204ENST00000376491 TNP1P09430 55 aa5.06□□□□□ -1.6
CLCN6-204ENST00000376491 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CLCN6-204ENST00000376491 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
CLCN6-204ENST00000376491 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
CLCN6-204ENST00000376491 A0A1B0GU69 56 aa4.99□□□□□ -1.61
CLCN6-204ENST00000376491 H7BZZ5 65 aa4.99□□□□□ -1.61
CLCN6-204ENST00000376491 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
CLCN6-204ENST00000376491 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
CLCN6-204ENST00000376491 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
CLCN6-204ENST00000376491 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
CLCN6-204ENST00000376491 Q1T7F1 81 aa4.87□□□□□ -1.63
CLCN6-204ENST00000376491 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
CLCN6-204ENST00000376491 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
CLCN6-204ENST00000376491 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CLCN6-204ENST00000376491 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CLCN6-204ENST00000376491 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
CLCN6-204ENST00000376491 K7ERS5 55 aa4.69□□□□□ -1.66
CLCN6-204ENST00000376491 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
CLCN6-204ENST00000376491 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
CLCN6-204ENST00000376491 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
CLCN6-204ENST00000376491 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CLCN6-204ENST00000376491 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
CLCN6-204ENST00000376491 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
CLCN6-204ENST00000376491 A6NED7 52 aa4.6□□□□□ -1.67
CLCN6-204ENST00000376491 UQCR11O14957 56 aa4.59□□□□□ -1.67
CLCN6-204ENST00000376491 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
CLCN6-204ENST00000376491 ROMO1P60602 79 aa4.57□□□□□ -1.68
CLCN6-204ENST00000376491 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CLCN6-204ENST00000376491 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
CLCN6-204ENST00000376491 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
CLCN6-204ENST00000376491 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
CLCN6-204ENST00000376491 MT1AP04731 61 aa4.5□□□□□ -1.69
CLCN6-204ENST00000376491 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
CLCN6-204ENST00000376491 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
CLCN6-204ENST00000376491 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
CLCN6-204ENST00000376491 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
CLCN6-204ENST00000376491 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
CLCN6-204ENST00000376491 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
CLCN6-204ENST00000376491 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
CLCN6-204ENST00000376491 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
CLCN6-204ENST00000376491 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
CLCN6-204ENST00000376491 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
CLCN6-204ENST00000376491 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
CLCN6-204ENST00000376491 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
CLCN6-204ENST00000376491 MT3P25713 68 aa4.1□□□□□ -1.75
CLCN6-204ENST00000376491 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
CLCN6-204ENST00000376491 INE1O15225 51 aa3.73□□□□□ -1.81
CLCN6-204ENST00000376491 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
CLCN6-204ENST00000376491 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CLCN6-204ENST00000376491 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
CLCN6-204ENST00000376491 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CLCN6-204ENST00000376491 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
CLCN6-204ENST00000376491 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
CLCN6-204ENST00000376491 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CLCN6-204ENST00000376491 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
CLCN6-204ENST00000376491 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CLCN6-204ENST00000376491 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
CLCN6-204ENST00000376491 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
CLCN6-204ENST00000376491 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CLCN6-204ENST00000376491 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CLCN6-204ENST00000376491 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
CLCN6-204ENST00000376491 PRM1P04553 51 aa2.09□□□□□ -2.07
CLCN6-204ENST00000376491 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms