RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
HLA-DMA-201ENST00000374843 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
HLA-DMA-201ENST00000374843 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
HLA-DMA-201ENST00000374843 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
HLA-DMA-201ENST00000374843 SPRR2EP22531 72 aa6.07□□□□□ -1.44
HLA-DMA-201ENST00000374843 SPRR2BP35325 72 aa6.07□□□□□ -1.44
HLA-DMA-201ENST00000374843 SPRR2AP35326 72 aa6.07□□□□□ -1.44
HLA-DMA-201ENST00000374843 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
HLA-DMA-201ENST00000374843 MT1GP13640 62 aa6.05□□□□□ -1.44
HLA-DMA-201ENST00000374843 NEBP20929 6669 aa5.99□□□□□ -1.45
HLA-DMA-201ENST00000374843 MT1MQ8N339 61 aa5.98□□□□□ -1.45
HLA-DMA-201ENST00000374843 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
HLA-DMA-201ENST00000374843 SPRR2DP22532 72 aa5.86□□□□□ -1.47
HLA-DMA-201ENST00000374843 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
HLA-DMA-201ENST00000374843 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
HLA-DMA-201ENST00000374843 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
HLA-DMA-201ENST00000374843 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
HLA-DMA-201ENST00000374843 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
HLA-DMA-201ENST00000374843 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
HLA-DMA-201ENST00000374843 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
HLA-DMA-201ENST00000374843 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
HLA-DMA-201ENST00000374843 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
HLA-DMA-201ENST00000374843 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
HLA-DMA-201ENST00000374843 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
HLA-DMA-201ENST00000374843 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
HLA-DMA-201ENST00000374843 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
HLA-DMA-201ENST00000374843 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
HLA-DMA-201ENST00000374843 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
HLA-DMA-201ENST00000374843 MT1AP04731 61 aa5.26□□□□□ -1.57
HLA-DMA-201ENST00000374843 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
HLA-DMA-201ENST00000374843 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
HLA-DMA-201ENST00000374843 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
HLA-DMA-201ENST00000374843 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
HLA-DMA-201ENST00000374843 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
HLA-DMA-201ENST00000374843 MT4P47944 62 aa5.05□□□□□ -1.6
HLA-DMA-201ENST00000374843 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
HLA-DMA-201ENST00000374843 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
HLA-DMA-201ENST00000374843 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
HLA-DMA-201ENST00000374843 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
HLA-DMA-201ENST00000374843 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
HLA-DMA-201ENST00000374843 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
HLA-DMA-201ENST00000374843 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
HLA-DMA-201ENST00000374843 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
HLA-DMA-201ENST00000374843 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
HLA-DMA-201ENST00000374843 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
HLA-DMA-201ENST00000374843 MT3P25713 68 aa4.75□□□□□ -1.65
HLA-DMA-201ENST00000374843 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
HLA-DMA-201ENST00000374843 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
HLA-DMA-201ENST00000374843 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
HLA-DMA-201ENST00000374843 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
HLA-DMA-201ENST00000374843 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
HLA-DMA-201ENST00000374843 H3BS24 57 aa4.33□□□□□ -1.72
HLA-DMA-201ENST00000374843 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
HLA-DMA-201ENST00000374843 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
HLA-DMA-201ENST00000374843 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
HLA-DMA-201ENST00000374843 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
HLA-DMA-201ENST00000374843 INE1O15225 51 aa4.2□□□□□ -1.74
HLA-DMA-201ENST00000374843 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
HLA-DMA-201ENST00000374843 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
HLA-DMA-201ENST00000374843 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
HLA-DMA-201ENST00000374843 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
HLA-DMA-201ENST00000374843 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
HLA-DMA-201ENST00000374843 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
HLA-DMA-201ENST00000374843 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
HLA-DMA-201ENST00000374843 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
HLA-DMA-201ENST00000374843 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
HLA-DMA-201ENST00000374843 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
HLA-DMA-201ENST00000374843 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
HLA-DMA-201ENST00000374843 PRM1P04553 51 aa3.59□□□□□ -1.83
HLA-DMA-201ENST00000374843 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
HLA-DMA-201ENST00000374843 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
HLA-DMA-201ENST00000374843 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
HLA-DMA-201ENST00000374843 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
HLA-DMA-201ENST00000374843 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
HLA-DMA-201ENST00000374843 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
HLA-DMA-201ENST00000374843 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
HLA-DMA-201ENST00000374843 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms