RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
NIPSNAP3A-201ENST00000374767 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
NIPSNAP3A-201ENST00000374767 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
NIPSNAP3A-201ENST00000374767 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
NIPSNAP3A-201ENST00000374767 MT1EP04732 61 aa5.01□□□□□ -1.61
NIPSNAP3A-201ENST00000374767 NDUFAF8A1L188 74 aa5□□□□□ -1.61
NIPSNAP3A-201ENST00000374767 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
NIPSNAP3A-201ENST00000374767 MT1LQ93083 61 aa4.94□□□□□ -1.62
NIPSNAP3A-201ENST00000374767 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
NIPSNAP3A-201ENST00000374767 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
NIPSNAP3A-201ENST00000374767 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
NIPSNAP3A-201ENST00000374767 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
NIPSNAP3A-201ENST00000374767 MT1GP13640 62 aa4.79□□□□□ -1.64
NIPSNAP3A-201ENST00000374767 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
NIPSNAP3A-201ENST00000374767 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
NIPSNAP3A-201ENST00000374767 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
NIPSNAP3A-201ENST00000374767 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.65
NIPSNAP3A-201ENST00000374767 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
NIPSNAP3A-201ENST00000374767 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
NIPSNAP3A-201ENST00000374767 MT1MQ8N339 61 aa4.71□□□□□ -1.66
NIPSNAP3A-201ENST00000374767 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
NIPSNAP3A-201ENST00000374767 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
NIPSNAP3A-201ENST00000374767 H3BS24 57 aa4.62□□□□□ -1.67
NIPSNAP3A-201ENST00000374767 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
NIPSNAP3A-201ENST00000374767 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
NIPSNAP3A-201ENST00000374767 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
NIPSNAP3A-201ENST00000374767 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 SPRR2EP22531 72 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 SPRR2BP35325 72 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 SPRR2AP35326 72 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.69
NIPSNAP3A-201ENST00000374767 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
NIPSNAP3A-201ENST00000374767 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
NIPSNAP3A-201ENST00000374767 NEBP20929 6669 aa4.32□□□□□ -1.72
NIPSNAP3A-201ENST00000374767 SPRR2DP22532 72 aa4.3□□□□□ -1.72
NIPSNAP3A-201ENST00000374767 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
NIPSNAP3A-201ENST00000374767 MT1AP04731 61 aa4.21□□□□□ -1.74
NIPSNAP3A-201ENST00000374767 INE1O15225 51 aa4.2□□□□□ -1.74
NIPSNAP3A-201ENST00000374767 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
NIPSNAP3A-201ENST00000374767 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
NIPSNAP3A-201ENST00000374767 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
NIPSNAP3A-201ENST00000374767 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
NIPSNAP3A-201ENST00000374767 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
NIPSNAP3A-201ENST00000374767 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
NIPSNAP3A-201ENST00000374767 MT3P25713 68 aa3.81□□□□□ -1.8
NIPSNAP3A-201ENST00000374767 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
NIPSNAP3A-201ENST00000374767 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
NIPSNAP3A-201ENST00000374767 MT4P47944 62 aa3.7□□□□□ -1.82
NIPSNAP3A-201ENST00000374767 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
NIPSNAP3A-201ENST00000374767 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
NIPSNAP3A-201ENST00000374767 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
NIPSNAP3A-201ENST00000374767 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
NIPSNAP3A-201ENST00000374767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
NIPSNAP3A-201ENST00000374767 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
NIPSNAP3A-201ENST00000374767 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
NIPSNAP3A-201ENST00000374767 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
NIPSNAP3A-201ENST00000374767 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
NIPSNAP3A-201ENST00000374767 PRM1P04553 51 aa3.25□□□□□ -1.89
NIPSNAP3A-201ENST00000374767 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
NIPSNAP3A-201ENST00000374767 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
NIPSNAP3A-201ENST00000374767 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
NIPSNAP3A-201ENST00000374767 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
NIPSNAP3A-201ENST00000374767 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
NIPSNAP3A-201ENST00000374767 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
NIPSNAP3A-201ENST00000374767 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
NIPSNAP3A-201ENST00000374767 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
NIPSNAP3A-201ENST00000374767 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
NIPSNAP3A-201ENST00000374767 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
NIPSNAP3A-201ENST00000374767 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
NIPSNAP3A-201ENST00000374767 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
NIPSNAP3A-201ENST00000374767 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
NIPSNAP3A-201ENST00000374767 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
NIPSNAP3A-201ENST00000374767 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
NIPSNAP3A-201ENST00000374767 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
NIPSNAP3A-201ENST00000374767 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 177.9 ms