RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 MT1EP04732 61 aa5.91□□□□□ -1.46
HDHD3-202ENST00000374180 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
HDHD3-202ENST00000374180 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
HDHD3-202ENST00000374180 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
HDHD3-202ENST00000374180 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
HDHD3-202ENST00000374180 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
HDHD3-202ENST00000374180 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
HDHD3-202ENST00000374180 KRTAP19-3Q7Z4W3 81 aa5.82□□□□□ -1.48
HDHD3-202ENST00000374180 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
HDHD3-202ENST00000374180 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
HDHD3-202ENST00000374180 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
HDHD3-202ENST00000374180 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
HDHD3-202ENST00000374180 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
HDHD3-202ENST00000374180 MT1GP13640 62 aa5.72□□□□□ -1.49
HDHD3-202ENST00000374180 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
HDHD3-202ENST00000374180 MT1LQ93083 61 aa5.7□□□□□ -1.5
HDHD3-202ENST00000374180 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
HDHD3-202ENST00000374180 H3BS24 57 aa5.63□□□□□ -1.51
HDHD3-202ENST00000374180 MT1MQ8N339 61 aa5.61□□□□□ -1.51
HDHD3-202ENST00000374180 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
HDHD3-202ENST00000374180 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
HDHD3-202ENST00000374180 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
HDHD3-202ENST00000374180 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
HDHD3-202ENST00000374180 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
HDHD3-202ENST00000374180 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
HDHD3-202ENST00000374180 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
HDHD3-202ENST00000374180 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
HDHD3-202ENST00000374180 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
HDHD3-202ENST00000374180 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
HDHD3-202ENST00000374180 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
HDHD3-202ENST00000374180 MT4P47944 62 aa5.17□□□□□ -1.58
HDHD3-202ENST00000374180 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
HDHD3-202ENST00000374180 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
HDHD3-202ENST00000374180 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
HDHD3-202ENST00000374180 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
HDHD3-202ENST00000374180 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
HDHD3-202ENST00000374180 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
HDHD3-202ENST00000374180 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
HDHD3-202ENST00000374180 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
HDHD3-202ENST00000374180 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
HDHD3-202ENST00000374180 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
HDHD3-202ENST00000374180 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
HDHD3-202ENST00000374180 MT1AP04731 61 aa4.85□□□□□ -1.63
HDHD3-202ENST00000374180 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
HDHD3-202ENST00000374180 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
HDHD3-202ENST00000374180 INE1O15225 51 aa4.69□□□□□ -1.66
HDHD3-202ENST00000374180 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
HDHD3-202ENST00000374180 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
HDHD3-202ENST00000374180 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
HDHD3-202ENST00000374180 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
HDHD3-202ENST00000374180 MT3P25713 68 aa4.44□□□□□ -1.7
HDHD3-202ENST00000374180 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
HDHD3-202ENST00000374180 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
HDHD3-202ENST00000374180 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
HDHD3-202ENST00000374180 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
HDHD3-202ENST00000374180 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
HDHD3-202ENST00000374180 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
HDHD3-202ENST00000374180 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
HDHD3-202ENST00000374180 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
HDHD3-202ENST00000374180 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
HDHD3-202ENST00000374180 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.77
HDHD3-202ENST00000374180 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
HDHD3-202ENST00000374180 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
HDHD3-202ENST00000374180 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
HDHD3-202ENST00000374180 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
HDHD3-202ENST00000374180 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
HDHD3-202ENST00000374180 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
HDHD3-202ENST00000374180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
HDHD3-202ENST00000374180 PRM1P04553 51 aa3.4□□□□□ -1.87
HDHD3-202ENST00000374180 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
HDHD3-202ENST00000374180 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
HDHD3-202ENST00000374180 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
HDHD3-202ENST00000374180 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
HDHD3-202ENST00000374180 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
HDHD3-202ENST00000374180 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
HDHD3-202ENST00000374180 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
HDHD3-202ENST00000374180 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 139.7 ms