RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
GJB1-202ENST00000374022 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
GJB1-202ENST00000374022 MT1EP04732 61 aa4.72□□□□□ -1.65
GJB1-202ENST00000374022 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
GJB1-202ENST00000374022 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
GJB1-202ENST00000374022 SPRR2EP22531 72 aa4.65□□□□□ -1.67
GJB1-202ENST00000374022 SPRR2BP35325 72 aa4.65□□□□□ -1.67
GJB1-202ENST00000374022 SPRR2AP35326 72 aa4.65□□□□□ -1.67
GJB1-202ENST00000374022 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
GJB1-202ENST00000374022 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
GJB1-202ENST00000374022 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
GJB1-202ENST00000374022 MT1LQ93083 61 aa4.58□□□□□ -1.68
GJB1-202ENST00000374022 NEBP20929 6669 aa4.56□□□□□ -1.68
GJB1-202ENST00000374022 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
GJB1-202ENST00000374022 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
GJB1-202ENST00000374022 MT1GP13640 62 aa4.52□□□□□ -1.69
GJB1-202ENST00000374022 SPRR2DP22532 72 aa4.48□□□□□ -1.69
GJB1-202ENST00000374022 MT1MQ8N339 61 aa4.46□□□□□ -1.7
GJB1-202ENST00000374022 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
GJB1-202ENST00000374022 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
GJB1-202ENST00000374022 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
GJB1-202ENST00000374022 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
GJB1-202ENST00000374022 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
GJB1-202ENST00000374022 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
GJB1-202ENST00000374022 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
GJB1-202ENST00000374022 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
GJB1-202ENST00000374022 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
GJB1-202ENST00000374022 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
GJB1-202ENST00000374022 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
GJB1-202ENST00000374022 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
GJB1-202ENST00000374022 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
GJB1-202ENST00000374022 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
GJB1-202ENST00000374022 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
GJB1-202ENST00000374022 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
GJB1-202ENST00000374022 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
GJB1-202ENST00000374022 MT1AP04731 61 aa3.89□□□□□ -1.79
GJB1-202ENST00000374022 MT4P47944 62 aa3.89□□□□□ -1.79
GJB1-202ENST00000374022 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
GJB1-202ENST00000374022 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
GJB1-202ENST00000374022 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
GJB1-202ENST00000374022 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
GJB1-202ENST00000374022 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
GJB1-202ENST00000374022 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
GJB1-202ENST00000374022 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
GJB1-202ENST00000374022 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
GJB1-202ENST00000374022 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
GJB1-202ENST00000374022 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
GJB1-202ENST00000374022 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
GJB1-202ENST00000374022 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
GJB1-202ENST00000374022 MT3P25713 68 aa3.54□□□□□ -1.84
GJB1-202ENST00000374022 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
GJB1-202ENST00000374022 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
GJB1-202ENST00000374022 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
GJB1-202ENST00000374022 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
GJB1-202ENST00000374022 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
GJB1-202ENST00000374022 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
GJB1-202ENST00000374022 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
GJB1-202ENST00000374022 PRM1P04553 51 aa3.23□□□□□ -1.89
GJB1-202ENST00000374022 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
GJB1-202ENST00000374022 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
GJB1-202ENST00000374022 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
GJB1-202ENST00000374022 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
GJB1-202ENST00000374022 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
GJB1-202ENST00000374022 MUC5ACP98088 5654 aa3□□□□□ -1.93
GJB1-202ENST00000374022 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
GJB1-202ENST00000374022 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
GJB1-202ENST00000374022 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
GJB1-202ENST00000374022 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
GJB1-202ENST00000374022 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
GJB1-202ENST00000374022 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
GJB1-202ENST00000374022 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
GJB1-202ENST00000374022 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
GJB1-202ENST00000374022 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
GJB1-202ENST00000374022 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
GJB1-202ENST00000374022 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
GJB1-202ENST00000374022 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
GJB1-202ENST00000374022 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 121.1 ms