RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
A1CF-202ENST00000373993 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
A1CF-202ENST00000373993 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
A1CF-202ENST00000373993 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
A1CF-202ENST00000373993 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
A1CF-202ENST00000373993 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
A1CF-202ENST00000373993 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
A1CF-202ENST00000373993 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
A1CF-202ENST00000373993 NEBP20929 6669 aa5.42□□□□□ -1.54
A1CF-202ENST00000373993 KMT2DO14686 5537 aa5.38□□□□□ -1.55
A1CF-202ENST00000373993 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
A1CF-202ENST00000373993 MT1XP80297 61 aa5.33□□□□□ -1.56
A1CF-202ENST00000373993 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
A1CF-202ENST00000373993 MDN1Q9NU22 5596 aa5.31□□□□□ -1.56
A1CF-202ENST00000373993 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
A1CF-202ENST00000373993 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
A1CF-202ENST00000373993 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
A1CF-202ENST00000373993 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
A1CF-202ENST00000373993 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
A1CF-202ENST00000373993 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
A1CF-202ENST00000373993 SPRR2EP22531 72 aa5.17□□□□□ -1.58
A1CF-202ENST00000373993 SPRR2BP35325 72 aa5.17□□□□□ -1.58
A1CF-202ENST00000373993 SPRR2AP35326 72 aa5.17□□□□□ -1.58
A1CF-202ENST00000373993 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
A1CF-202ENST00000373993 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
A1CF-202ENST00000373993 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
A1CF-202ENST00000373993 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
A1CF-202ENST00000373993 SPRR2DP22532 72 aa4.99□□□□□ -1.61
A1CF-202ENST00000373993 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
A1CF-202ENST00000373993 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
A1CF-202ENST00000373993 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
A1CF-202ENST00000373993 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
A1CF-202ENST00000373993 MT1EP04732 61 aa4.71□□□□□ -1.66
A1CF-202ENST00000373993 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
A1CF-202ENST00000373993 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
A1CF-202ENST00000373993 MT1LQ93083 61 aa4.68□□□□□ -1.66
A1CF-202ENST00000373993 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
A1CF-202ENST00000373993 MT1GP13640 62 aa4.54□□□□□ -1.68
A1CF-202ENST00000373993 MT1MQ8N339 61 aa4.49□□□□□ -1.69
A1CF-202ENST00000373993 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
A1CF-202ENST00000373993 MT1AP04731 61 aa4.41□□□□□ -1.7
A1CF-202ENST00000373993 MT4P47944 62 aa4.4□□□□□ -1.7
A1CF-202ENST00000373993 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
A1CF-202ENST00000373993 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
A1CF-202ENST00000373993 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
A1CF-202ENST00000373993 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
A1CF-202ENST00000373993 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
A1CF-202ENST00000373993 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
A1CF-202ENST00000373993 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
A1CF-202ENST00000373993 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
A1CF-202ENST00000373993 PRM1P04553 51 aa4.1□□□□□ -1.75
A1CF-202ENST00000373993 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
A1CF-202ENST00000373993 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
A1CF-202ENST00000373993 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
A1CF-202ENST00000373993 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
A1CF-202ENST00000373993 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
A1CF-202ENST00000373993 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
A1CF-202ENST00000373993 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
A1CF-202ENST00000373993 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
A1CF-202ENST00000373993 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
A1CF-202ENST00000373993 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
A1CF-202ENST00000373993 MT3P25713 68 aa3.58□□□□□ -1.84
A1CF-202ENST00000373993 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
A1CF-202ENST00000373993 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
A1CF-202ENST00000373993 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
A1CF-202ENST00000373993 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
A1CF-202ENST00000373993 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
A1CF-202ENST00000373993 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
A1CF-202ENST00000373993 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
A1CF-202ENST00000373993 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
A1CF-202ENST00000373993 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
A1CF-202ENST00000373993 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
A1CF-202ENST00000373993 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
A1CF-202ENST00000373993 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
A1CF-202ENST00000373993 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
A1CF-202ENST00000373993 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
A1CF-202ENST00000373993 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms