RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 Q1T7F1 81 aa4.76□□□□□ -1.65
SNCG-202ENST00000372017 PSPHP1O15172 72 aa4.75□□□□□ -1.65
SNCG-202ENST00000372017 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
SNCG-202ENST00000372017 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
SNCG-202ENST00000372017 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
SNCG-202ENST00000372017 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SNCG-202ENST00000372017 V9GYY9 64 aa4.71□□□□□ -1.66
SNCG-202ENST00000372017 MT1EP04732 61 aa4.68□□□□□ -1.66
SNCG-202ENST00000372017 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
SNCG-202ENST00000372017 RPS28P62857 69 aaKnown RBP4.65□□□□□ -1.67
SNCG-202ENST00000372017 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
SNCG-202ENST00000372017 TNP1P09430 55 aa4.64□□□□□ -1.67
SNCG-202ENST00000372017 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
SNCG-202ENST00000372017 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SNCG-202ENST00000372017 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
SNCG-202ENST00000372017 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
SNCG-202ENST00000372017 A6NED7 52 aa4.55□□□□□ -1.68
SNCG-202ENST00000372017 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
SNCG-202ENST00000372017 K7ERS5 55 aa4.5□□□□□ -1.69
SNCG-202ENST00000372017 MT1LQ93083 61 aa4.5□□□□□ -1.69
SNCG-202ENST00000372017 MT1GP13640 62 aa4.47□□□□□ -1.69
SNCG-202ENST00000372017 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
SNCG-202ENST00000372017 MT1MQ8N339 61 aa4.44□□□□□ -1.7
SNCG-202ENST00000372017 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
SNCG-202ENST00000372017 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
SNCG-202ENST00000372017 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
SNCG-202ENST00000372017 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SNCG-202ENST00000372017 ROMO1P60602 79 aa4.31□□□□□ -1.72
SNCG-202ENST00000372017 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
SNCG-202ENST00000372017 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
SNCG-202ENST00000372017 MT4P47944 62 aa4.29□□□□□ -1.72
SNCG-202ENST00000372017 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
SNCG-202ENST00000372017 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SNCG-202ENST00000372017 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SNCG-202ENST00000372017 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
SNCG-202ENST00000372017 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
SNCG-202ENST00000372017 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
SNCG-202ENST00000372017 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
SNCG-202ENST00000372017 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
SNCG-202ENST00000372017 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
SNCG-202ENST00000372017 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
SNCG-202ENST00000372017 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
SNCG-202ENST00000372017 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
SNCG-202ENST00000372017 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SNCG-202ENST00000372017 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
SNCG-202ENST00000372017 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SNCG-202ENST00000372017 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
SNCG-202ENST00000372017 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
SNCG-202ENST00000372017 MT1AP04731 61 aa3.81□□□□□ -1.8
SNCG-202ENST00000372017 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
SNCG-202ENST00000372017 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
SNCG-202ENST00000372017 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
SNCG-202ENST00000372017 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SNCG-202ENST00000372017 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SNCG-202ENST00000372017 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SNCG-202ENST00000372017 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
SNCG-202ENST00000372017 MT3P25713 68 aa3.45□□□□□ -1.86
SNCG-202ENST00000372017 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SNCG-202ENST00000372017 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SNCG-202ENST00000372017 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SNCG-202ENST00000372017 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
SNCG-202ENST00000372017 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SNCG-202ENST00000372017 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
SNCG-202ENST00000372017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SNCG-202ENST00000372017 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
SNCG-202ENST00000372017 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SNCG-202ENST00000372017 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SNCG-202ENST00000372017 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SNCG-202ENST00000372017 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SNCG-202ENST00000372017 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SNCG-202ENST00000372017 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SNCG-202ENST00000372017 INE1O15225 51 aa2.51□□□□□ -2.01
SNCG-202ENST00000372017 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SNCG-202ENST00000372017 PRM1P04553 51 aa2.25□□□□□ -2.05
SNCG-202ENST00000372017 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SNCG-202ENST00000372017 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SNCG-202ENST00000372017 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 240 ms