RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MUC12Q9UKN1 5478 aa9.22□□□□□ -0.93
ATPAF1-202ENST00000371937 KRTAP19-3Q7Z4W3 81 aa9.19□□□□□ -0.94
ATPAF1-202ENST00000371937 MT1GP13640 62 aa9.13□□□□□ -0.95
ATPAF1-202ENST00000371937 KRTAP6-3Q3LI67 103 aa9.12□□□□□ -0.95
ATPAF1-202ENST00000371937 NDUFAF8A1L188 74 aa9.08□□□□□ -0.96
ATPAF1-202ENST00000371937 LCE5AQ5TCM9 118 aa9.03□□□□□ -0.96
ATPAF1-202ENST00000371937 KRTAP4-7Q9BYR0 210 aa9.02□□□□□ -0.97
ATPAF1-202ENST00000371937 LUZP6Q538Z0 58 aa9□□□□□ -0.97
ATPAF1-202ENST00000371937 MT1MQ8N339 61 aa8.99□□□□□ -0.97
ATPAF1-202ENST00000371937 LCE1AQ5T7P2 110 aa8.96□□□□□ -0.98
ATPAF1-202ENST00000371937 MDN1Q9NU22 5596 aa8.91□□□□□ -0.98
ATPAF1-202ENST00000371937 SPRR2EP22531 72 aa8.9□□□□□ -0.98
ATPAF1-202ENST00000371937 SPRR2BP35325 72 aa8.9□□□□□ -0.98
ATPAF1-202ENST00000371937 SPRR2AP35326 72 aa8.9□□□□□ -0.98
ATPAF1-202ENST00000371937 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
ATPAF1-202ENST00000371937 KRTAP4-3Q9BYR4 195 aa8.77□□□□□ -1
ATPAF1-202ENST00000371937 KRTAP9-6A8MVA2 160 aa8.7□□□□□ -1.02
ATPAF1-202ENST00000371937 H3BS24 57 aa8.67□□□□□ -1.02
ATPAF1-202ENST00000371937 SPRR2DP22532 72 aa8.58□□□□□ -1.04
ATPAF1-202ENST00000371937 DSTQ03001 7570 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-202ENST00000371937 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
ATPAF1-202ENST00000371937 NEBP20929 6669 aa8.44□□□□□ -1.06
ATPAF1-202ENST00000371937 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
ATPAF1-202ENST00000371937 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
ATPAF1-202ENST00000371937 KRTAP5-5Q701N2 237 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-202ENST00000371937 KRTAP2-3P0C7H8 128 aa8.07□□□□□ -1.12
ATPAF1-202ENST00000371937 KRTAP2-4Q9BYR9 128 aa8.07□□□□□ -1.12
ATPAF1-202ENST00000371937 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
ATPAF1-202ENST00000371937 MT1AP04731 61 aa7.96□□□□□ -1.14
ATPAF1-202ENST00000371937 KRTAP6-1Q3LI64 71 aa7.87□□□□□ -1.15
ATPAF1-202ENST00000371937 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
ATPAF1-202ENST00000371937 KRTAP2-2Q9BYT5 123 aa7.82□□□□□ -1.16
ATPAF1-202ENST00000371937 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
ATPAF1-202ENST00000371937 SYNE1Q8NF91 8797 aaKnown RBP7.64□□□□□ -1.19
ATPAF1-202ENST00000371937 LCE4AQ5TA78 99 aa7.63□□□□□ -1.19
ATPAF1-202ENST00000371937 KRTAP12-4P60329 112 aa7.58□□□□□ -1.2
ATPAF1-202ENST00000371937 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
ATPAF1-202ENST00000371937 INE1O15225 51 aa7.52□□□□□ -1.21
ATPAF1-202ENST00000371937 MT4P47944 62 aa7.43□□□□□ -1.22
ATPAF1-202ENST00000371937 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
ATPAF1-202ENST00000371937 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
ATPAF1-202ENST00000371937 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
ATPAF1-202ENST00000371937 KRTAP6-2Q3LI66 62 aa7.27□□□□□ -1.25
ATPAF1-202ENST00000371937 KRTAP20-2Q3LI61 65 aa7.24□□□□□ -1.25
ATPAF1-202ENST00000371937 MT3P25713 68 aa7.24□□□□□ -1.25
ATPAF1-202ENST00000371937 HMCN1Q96RW7 5635 aa7.21□□□□□ -1.25
ATPAF1-202ENST00000371937 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
ATPAF1-202ENST00000371937 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
ATPAF1-202ENST00000371937 LCE3DQ9BYE3 92 aa6.97□□□□□ -1.29
ATPAF1-202ENST00000371937 LCE3EQ5T5B0 92 aa6.77□□□□□ -1.33
ATPAF1-202ENST00000371937 OBSCNQ5VST9 7968 aa6.6□□□□□ -1.35
ATPAF1-202ENST00000371937 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
ATPAF1-202ENST00000371937 LCE1EQ5T753 118 aa6.29□□□□□ -1.4
ATPAF1-202ENST00000371937 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
ATPAF1-202ENST00000371937 KRTAP5-1Q6L8H4 278 aa6.07□□□□□ -1.44
ATPAF1-202ENST00000371937 KRTAP5-10Q6L8G5 202 aa6.06□□□□□ -1.44
ATPAF1-202ENST00000371937 KRTAP5-8O75690 187 aa6.04□□□□□ -1.44
ATPAF1-202ENST00000371937 LCE1BQ5T7P3 118 aa5.88□□□□□ -1.47
ATPAF1-202ENST00000371937 PRM1P04553 51 aa5.88□□□□□ -1.47
ATPAF1-202ENST00000371937 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
ATPAF1-202ENST00000371937 LCE1CQ5T751 118 aa5.85□□□□□ -1.47
ATPAF1-202ENST00000371937 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
ATPAF1-202ENST00000371937 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
ATPAF1-202ENST00000371937 GPR98Q8WXG9 6306 aa5.74□□□□□ -1.49
ATPAF1-202ENST00000371937 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
ATPAF1-202ENST00000371937 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-202ENST00000371937 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
ATPAF1-202ENST00000371937 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
ATPAF1-202ENST00000371937 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-202ENST00000371937 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
ATPAF1-202ENST00000371937 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-202ENST00000371937 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
ATPAF1-202ENST00000371937 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
ATPAF1-202ENST00000371937 PHGR1C9JFL3 82 aa4.43□□□□□ -1.7
ATPAF1-202ENST00000371937 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
ATPAF1-202ENST00000371937 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
ATPAF1-202ENST00000371937 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms