RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
TCTN3-202ENST00000371209 MT1XP80297 61 aa4.39□□□□□ -1.71
TCTN3-202ENST00000371209 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
TCTN3-202ENST00000371209 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
TCTN3-202ENST00000371209 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
TCTN3-202ENST00000371209 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
TCTN3-202ENST00000371209 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
TCTN3-202ENST00000371209 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
TCTN3-202ENST00000371209 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.73
TCTN3-202ENST00000371209 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
TCTN3-202ENST00000371209 TNP1P09430 55 aa4.14□□□□□ -1.75
TCTN3-202ENST00000371209 KMT2DO14686 5537 aa4.11□□□□□ -1.75
TCTN3-202ENST00000371209 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
TCTN3-202ENST00000371209 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
TCTN3-202ENST00000371209 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
TCTN3-202ENST00000371209 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
TCTN3-202ENST00000371209 MT3P25713 68 aa3.99□□□□□ -1.77
TCTN3-202ENST00000371209 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
TCTN3-202ENST00000371209 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
TCTN3-202ENST00000371209 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
TCTN3-202ENST00000371209 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
TCTN3-202ENST00000371209 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
TCTN3-202ENST00000371209 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
TCTN3-202ENST00000371209 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
TCTN3-202ENST00000371209 MT1EP04732 61 aa3.86□□□□□ -1.79
TCTN3-202ENST00000371209 INE1O15225 51 aa3.84□□□□□ -1.8
TCTN3-202ENST00000371209 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
TCTN3-202ENST00000371209 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
TCTN3-202ENST00000371209 SPRR2EP22531 72 aa3.79□□□□□ -1.8
TCTN3-202ENST00000371209 SPRR2BP35325 72 aa3.79□□□□□ -1.8
TCTN3-202ENST00000371209 SPRR2AP35326 72 aa3.79□□□□□ -1.8
TCTN3-202ENST00000371209 NEBP20929 6669 aa3.78□□□□□ -1.8
TCTN3-202ENST00000371209 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
TCTN3-202ENST00000371209 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
TCTN3-202ENST00000371209 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
TCTN3-202ENST00000371209 MT1LQ93083 61 aa3.74□□□□□ -1.81
TCTN3-202ENST00000371209 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
TCTN3-202ENST00000371209 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
TCTN3-202ENST00000371209 MT1GP13640 62 aa3.68□□□□□ -1.82
TCTN3-202ENST00000371209 SPRR2DP22532 72 aa3.66□□□□□ -1.82
TCTN3-202ENST00000371209 MT1MQ8N339 61 aa3.65□□□□□ -1.83
TCTN3-202ENST00000371209 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
TCTN3-202ENST00000371209 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
TCTN3-202ENST00000371209 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
TCTN3-202ENST00000371209 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
TCTN3-202ENST00000371209 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
TCTN3-202ENST00000371209 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
TCTN3-202ENST00000371209 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
TCTN3-202ENST00000371209 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
TCTN3-202ENST00000371209 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
TCTN3-202ENST00000371209 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
TCTN3-202ENST00000371209 MT4P47944 62 aa3.19□□□□□ -1.9
TCTN3-202ENST00000371209 MT1AP04731 61 aa3.18□□□□□ -1.9
TCTN3-202ENST00000371209 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
TCTN3-202ENST00000371209 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
TCTN3-202ENST00000371209 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
TCTN3-202ENST00000371209 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TCTN3-202ENST00000371209 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
TCTN3-202ENST00000371209 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
TCTN3-202ENST00000371209 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
TCTN3-202ENST00000371209 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
TCTN3-202ENST00000371209 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
TCTN3-202ENST00000371209 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
TCTN3-202ENST00000371209 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
TCTN3-202ENST00000371209 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
TCTN3-202ENST00000371209 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
TCTN3-202ENST00000371209 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
TCTN3-202ENST00000371209 PRM1P04553 51 aa2.6□□□□□ -1.99
TCTN3-202ENST00000371209 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
TCTN3-202ENST00000371209 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
TCTN3-202ENST00000371209 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
TCTN3-202ENST00000371209 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
TCTN3-202ENST00000371209 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
TCTN3-202ENST00000371209 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
TCTN3-202ENST00000371209 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
TCTN3-202ENST00000371209 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TCTN3-202ENST00000371209 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms