RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
RPF1-201ENST00000370654 MT1LQ93083 61 aa4.68□□□□□ -1.66
RPF1-201ENST00000370654 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
RPF1-201ENST00000370654 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
RPF1-201ENST00000370654 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
RPF1-201ENST00000370654 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
RPF1-201ENST00000370654 A0A1B0GU33 70 aa4.64□□□□□ -1.67
RPF1-201ENST00000370654 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
RPF1-201ENST00000370654 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
RPF1-201ENST00000370654 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
RPF1-201ENST00000370654 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
RPF1-201ENST00000370654 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
RPF1-201ENST00000370654 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
RPF1-201ENST00000370654 A8MU10 97 aa4.56□□□□□ -1.68
RPF1-201ENST00000370654 PSPHP1O15172 72 aa4.56□□□□□ -1.68
RPF1-201ENST00000370654 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
RPF1-201ENST00000370654 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
RPF1-201ENST00000370654 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.69
RPF1-201ENST00000370654 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
RPF1-201ENST00000370654 H7BZZ5 65 aa4.5□□□□□ -1.69
RPF1-201ENST00000370654 COX7CP15954 63 aa4.49□□□□□ -1.69
RPF1-201ENST00000370654 A0A1B0GU69 56 aa4.45□□□□□ -1.7
RPF1-201ENST00000370654 TNP1P09430 55 aa4.45□□□□□ -1.7
RPF1-201ENST00000370654 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
RPF1-201ENST00000370654 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
RPF1-201ENST00000370654 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
RPF1-201ENST00000370654 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
RPF1-201ENST00000370654 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
RPF1-201ENST00000370654 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
RPF1-201ENST00000370654 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
RPF1-201ENST00000370654 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
RPF1-201ENST00000370654 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
RPF1-201ENST00000370654 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
RPF1-201ENST00000370654 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
RPF1-201ENST00000370654 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
RPF1-201ENST00000370654 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
RPF1-201ENST00000370654 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
RPF1-201ENST00000370654 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
RPF1-201ENST00000370654 K7ERS5 55 aa4.17□□□□□ -1.74
RPF1-201ENST00000370654 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
RPF1-201ENST00000370654 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
RPF1-201ENST00000370654 UQCR11O14957 56 aa4.09□□□□□ -1.75
RPF1-201ENST00000370654 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
RPF1-201ENST00000370654 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
RPF1-201ENST00000370654 A6NED7 52 aa4.07□□□□□ -1.76
RPF1-201ENST00000370654 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
RPF1-201ENST00000370654 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
RPF1-201ENST00000370654 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
RPF1-201ENST00000370654 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
RPF1-201ENST00000370654 MT1AP04731 61 aa3.96□□□□□ -1.78
RPF1-201ENST00000370654 TMEM258P61165 79 aa3.93□□□□□ -1.78
RPF1-201ENST00000370654 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
RPF1-201ENST00000370654 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
RPF1-201ENST00000370654 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
RPF1-201ENST00000370654 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
RPF1-201ENST00000370654 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
RPF1-201ENST00000370654 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
RPF1-201ENST00000370654 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
RPF1-201ENST00000370654 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
RPF1-201ENST00000370654 Q1T7F1 81 aa3.76□□□□□ -1.81
RPF1-201ENST00000370654 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
RPF1-201ENST00000370654 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
RPF1-201ENST00000370654 ROMO1P60602 79 aa3.68□□□□□ -1.82
RPF1-201ENST00000370654 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
RPF1-201ENST00000370654 MT3P25713 68 aa3.6□□□□□ -1.83
RPF1-201ENST00000370654 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
RPF1-201ENST00000370654 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
RPF1-201ENST00000370654 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
RPF1-201ENST00000370654 INE1O15225 51 aa3.1□□□□□ -1.91
RPF1-201ENST00000370654 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
RPF1-201ENST00000370654 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
RPF1-201ENST00000370654 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
RPF1-201ENST00000370654 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
RPF1-201ENST00000370654 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RPF1-201ENST00000370654 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
RPF1-201ENST00000370654 PRM1P04553 51 aa1.89□□□□□ -2.11
RPF1-201ENST00000370654 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 465 ms