RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
GABRE-201ENST00000370328 KRTAP10-12P60413 245 aa3□□□□□ -1.93
GABRE-201ENST00000370328 NEBP20929 6669 aa2.99□□□□□ -1.93
GABRE-201ENST00000370328 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
GABRE-201ENST00000370328 SPRR2EP22531 72 aa2.94□□□□□ -1.94
GABRE-201ENST00000370328 SPRR2BP35325 72 aa2.94□□□□□ -1.94
GABRE-201ENST00000370328 SPRR2AP35326 72 aa2.94□□□□□ -1.94
GABRE-201ENST00000370328 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
GABRE-201ENST00000370328 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
GABRE-201ENST00000370328 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
GABRE-201ENST00000370328 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
GABRE-201ENST00000370328 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
GABRE-201ENST00000370328 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
GABRE-201ENST00000370328 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
GABRE-201ENST00000370328 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
GABRE-201ENST00000370328 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
GABRE-201ENST00000370328 SPRR2DP22532 72 aa2.82□□□□□ -1.96
GABRE-201ENST00000370328 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
GABRE-201ENST00000370328 MT1EP04732 61 aa2.81□□□□□ -1.96
GABRE-201ENST00000370328 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
GABRE-201ENST00000370328 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
GABRE-201ENST00000370328 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
GABRE-201ENST00000370328 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
GABRE-201ENST00000370328 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
GABRE-201ENST00000370328 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
GABRE-201ENST00000370328 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
GABRE-201ENST00000370328 MT1LQ93083 61 aa2.71□□□□□ -1.97
GABRE-201ENST00000370328 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
GABRE-201ENST00000370328 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
GABRE-201ENST00000370328 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
GABRE-201ENST00000370328 MT1GP13640 62 aa2.67□□□□□ -1.98
GABRE-201ENST00000370328 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
GABRE-201ENST00000370328 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
GABRE-201ENST00000370328 MT1MQ8N339 61 aa2.67□□□□□ -1.98
GABRE-201ENST00000370328 LCE1DQ5T752 114 aa2.65□□□□□ -1.98
GABRE-201ENST00000370328 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
GABRE-201ENST00000370328 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
GABRE-201ENST00000370328 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
GABRE-201ENST00000370328 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
GABRE-201ENST00000370328 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
GABRE-201ENST00000370328 MT4P47944 62 aa2.58□□□□□ -2
GABRE-201ENST00000370328 KRTAP12-4P60329 112 aa2.58□□□□□ -2
GABRE-201ENST00000370328 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
GABRE-201ENST00000370328 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
GABRE-201ENST00000370328 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
GABRE-201ENST00000370328 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
GABRE-201ENST00000370328 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
GABRE-201ENST00000370328 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
GABRE-201ENST00000370328 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
GABRE-201ENST00000370328 PRM1P04553 51 aa2.39□□□□□ -2.03
GABRE-201ENST00000370328 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
GABRE-201ENST00000370328 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
GABRE-201ENST00000370328 LCE4AQ5TA78 99 aa2.34□□□□□ -2.03
GABRE-201ENST00000370328 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
GABRE-201ENST00000370328 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
GABRE-201ENST00000370328 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
GABRE-201ENST00000370328 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
GABRE-201ENST00000370328 MT1AP04731 61 aa2.26□□□□□ -2.05
GABRE-201ENST00000370328 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
GABRE-201ENST00000370328 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
GABRE-201ENST00000370328 MT3P25713 68 aa2.1□□□□□ -2.07
GABRE-201ENST00000370328 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
GABRE-201ENST00000370328 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
GABRE-201ENST00000370328 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
GABRE-201ENST00000370328 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
GABRE-201ENST00000370328 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
GABRE-201ENST00000370328 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
GABRE-201ENST00000370328 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
GABRE-201ENST00000370328 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
GABRE-201ENST00000370328 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
GABRE-201ENST00000370328 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
GABRE-201ENST00000370328 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
GABRE-201ENST00000370328 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
GABRE-201ENST00000370328 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
GABRE-201ENST00000370328 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
GABRE-201ENST00000370328 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
GABRE-201ENST00000370328 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 1065 ms