RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SPRR2EP22531 72 aa5.82□□□□□ -1.48
PRPF38B-202ENST00000370022 SPRR2BP35325 72 aa5.82□□□□□ -1.48
PRPF38B-202ENST00000370022 SPRR2AP35326 72 aa5.82□□□□□ -1.48
PRPF38B-202ENST00000370022 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
PRPF38B-202ENST00000370022 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
PRPF38B-202ENST00000370022 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
PRPF38B-202ENST00000370022 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
PRPF38B-202ENST00000370022 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
PRPF38B-202ENST00000370022 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PRPF38B-202ENST00000370022 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
PRPF38B-202ENST00000370022 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
PRPF38B-202ENST00000370022 MT1EP04732 61 aa5.74□□□□□ -1.49
PRPF38B-202ENST00000370022 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
PRPF38B-202ENST00000370022 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
PRPF38B-202ENST00000370022 SPRR2DP22532 72 aa5.63□□□□□ -1.51
PRPF38B-202ENST00000370022 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
PRPF38B-202ENST00000370022 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
PRPF38B-202ENST00000370022 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
PRPF38B-202ENST00000370022 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.52
PRPF38B-202ENST00000370022 MT1GP13640 62 aa5.55□□□□□ -1.52
PRPF38B-202ENST00000370022 MT1LQ93083 61 aa5.55□□□□□ -1.52
PRPF38B-202ENST00000370022 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
PRPF38B-202ENST00000370022 INE1O15225 51 aa5.47□□□□□ -1.53
PRPF38B-202ENST00000370022 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.53
PRPF38B-202ENST00000370022 MT1MQ8N339 61 aa5.43□□□□□ -1.54
PRPF38B-202ENST00000370022 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.55
PRPF38B-202ENST00000370022 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
PRPF38B-202ENST00000370022 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
PRPF38B-202ENST00000370022 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
PRPF38B-202ENST00000370022 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.57
PRPF38B-202ENST00000370022 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
PRPF38B-202ENST00000370022 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
PRPF38B-202ENST00000370022 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
PRPF38B-202ENST00000370022 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
PRPF38B-202ENST00000370022 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
PRPF38B-202ENST00000370022 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
PRPF38B-202ENST00000370022 MT4P47944 62 aa4.95□□□□□ -1.62
PRPF38B-202ENST00000370022 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
PRPF38B-202ENST00000370022 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
PRPF38B-202ENST00000370022 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
PRPF38B-202ENST00000370022 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
PRPF38B-202ENST00000370022 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
PRPF38B-202ENST00000370022 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
PRPF38B-202ENST00000370022 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
PRPF38B-202ENST00000370022 MT1AP04731 61 aa4.74□□□□□ -1.65
PRPF38B-202ENST00000370022 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
PRPF38B-202ENST00000370022 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
PRPF38B-202ENST00000370022 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.66
PRPF38B-202ENST00000370022 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
PRPF38B-202ENST00000370022 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
PRPF38B-202ENST00000370022 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
PRPF38B-202ENST00000370022 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
PRPF38B-202ENST00000370022 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
PRPF38B-202ENST00000370022 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
PRPF38B-202ENST00000370022 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
PRPF38B-202ENST00000370022 MT3P25713 68 aa4.34□□□□□ -1.71
PRPF38B-202ENST00000370022 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
PRPF38B-202ENST00000370022 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
PRPF38B-202ENST00000370022 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-202ENST00000370022 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
PRPF38B-202ENST00000370022 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
PRPF38B-202ENST00000370022 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
PRPF38B-202ENST00000370022 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
PRPF38B-202ENST00000370022 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.8
PRPF38B-202ENST00000370022 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
PRPF38B-202ENST00000370022 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
PRPF38B-202ENST00000370022 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
PRPF38B-202ENST00000370022 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
PRPF38B-202ENST00000370022 PRM1P04553 51 aa3.42□□□□□ -1.86
PRPF38B-202ENST00000370022 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PRPF38B-202ENST00000370022 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
PRPF38B-202ENST00000370022 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
PRPF38B-202ENST00000370022 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
PRPF38B-202ENST00000370022 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
PRPF38B-202ENST00000370022 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
PRPF38B-202ENST00000370022 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
PRPF38B-202ENST00000370022 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms