RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 H3BS24 57 aa6.38□□□□□ -1.39
UBE3D-203ENST00000369747 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
UBE3D-203ENST00000369747 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
UBE3D-203ENST00000369747 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
UBE3D-203ENST00000369747 KRTAP5-9P26371 169 aa6.36□□□□□ -1.39
UBE3D-203ENST00000369747 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
UBE3D-203ENST00000369747 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
UBE3D-203ENST00000369747 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
UBE3D-203ENST00000369747 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
UBE3D-203ENST00000369747 MT1EP04732 61 aa6.26□□□□□ -1.41
UBE3D-203ENST00000369747 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
UBE3D-203ENST00000369747 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
UBE3D-203ENST00000369747 SPRR2EP22531 72 aa6.09□□□□□ -1.43
UBE3D-203ENST00000369747 SPRR2BP35325 72 aa6.09□□□□□ -1.43
UBE3D-203ENST00000369747 SPRR2AP35326 72 aa6.09□□□□□ -1.43
UBE3D-203ENST00000369747 MT1LQ93083 61 aa6.09□□□□□ -1.43
UBE3D-203ENST00000369747 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
UBE3D-203ENST00000369747 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
UBE3D-203ENST00000369747 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
UBE3D-203ENST00000369747 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
UBE3D-203ENST00000369747 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
UBE3D-203ENST00000369747 NEBP20929 6669 aa5.98□□□□□ -1.45
UBE3D-203ENST00000369747 MT1GP13640 62 aa5.98□□□□□ -1.45
UBE3D-203ENST00000369747 MT1MQ8N339 61 aa5.91□□□□□ -1.46
UBE3D-203ENST00000369747 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
UBE3D-203ENST00000369747 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
UBE3D-203ENST00000369747 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
UBE3D-203ENST00000369747 SPRR2DP22532 72 aa5.87□□□□□ -1.47
UBE3D-203ENST00000369747 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
UBE3D-203ENST00000369747 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
UBE3D-203ENST00000369747 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
UBE3D-203ENST00000369747 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
UBE3D-203ENST00000369747 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
UBE3D-203ENST00000369747 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
UBE3D-203ENST00000369747 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
UBE3D-203ENST00000369747 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
UBE3D-203ENST00000369747 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
UBE3D-203ENST00000369747 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
UBE3D-203ENST00000369747 INE1O15225 51 aa5.37□□□□□ -1.55
UBE3D-203ENST00000369747 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
UBE3D-203ENST00000369747 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
UBE3D-203ENST00000369747 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
UBE3D-203ENST00000369747 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
UBE3D-203ENST00000369747 MT1AP04731 61 aa5.16□□□□□ -1.58
UBE3D-203ENST00000369747 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE3D-203ENST00000369747 MT4P47944 62 aa5.13□□□□□ -1.59
UBE3D-203ENST00000369747 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
UBE3D-203ENST00000369747 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
UBE3D-203ENST00000369747 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
UBE3D-203ENST00000369747 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
UBE3D-203ENST00000369747 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
UBE3D-203ENST00000369747 MT3P25713 68 aa4.68□□□□□ -1.66
UBE3D-203ENST00000369747 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
UBE3D-203ENST00000369747 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
UBE3D-203ENST00000369747 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
UBE3D-203ENST00000369747 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
UBE3D-203ENST00000369747 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
UBE3D-203ENST00000369747 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
UBE3D-203ENST00000369747 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
UBE3D-203ENST00000369747 PRM1P04553 51 aa4.19□□□□□ -1.74
UBE3D-203ENST00000369747 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
UBE3D-203ENST00000369747 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
UBE3D-203ENST00000369747 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
UBE3D-203ENST00000369747 MUC5ACP98088 5654 aa4□□□□□ -1.77
UBE3D-203ENST00000369747 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
UBE3D-203ENST00000369747 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
UBE3D-203ENST00000369747 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
UBE3D-203ENST00000369747 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
UBE3D-203ENST00000369747 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
UBE3D-203ENST00000369747 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
UBE3D-203ENST00000369747 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
UBE3D-203ENST00000369747 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
UBE3D-203ENST00000369747 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
UBE3D-203ENST00000369747 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
UBE3D-203ENST00000369747 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
UBE3D-203ENST00000369747 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
UBE3D-203ENST00000369747 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 267.6 ms