RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
SMNDC1-201ENST00000369592 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
SMNDC1-201ENST00000369592 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.21
SMNDC1-201ENST00000369592 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
SMNDC1-201ENST00000369592 TMEM258P61165 79 aa7.51□□□□□ -1.21
SMNDC1-201ENST00000369592 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
SMNDC1-201ENST00000369592 MT1GP13640 62 aa7.4□□□□□ -1.22
SMNDC1-201ENST00000369592 TNP1P09430 55 aa7.38□□□□□ -1.23
SMNDC1-201ENST00000369592 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
SMNDC1-201ENST00000369592 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
SMNDC1-201ENST00000369592 AHNAK2Q8IVF2 5795 aa7.34□□□□□ -1.23
SMNDC1-201ENST00000369592 MT1LQ93083 61 aa7.34□□□□□ -1.23
SMNDC1-201ENST00000369592 UQCR11O14957 56 aa7.31□□□□□ -1.24
SMNDC1-201ENST00000369592 MT1MQ8N339 61 aa7.28□□□□□ -1.24
SMNDC1-201ENST00000369592 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
SMNDC1-201ENST00000369592 KRTAP5-10Q6L8G5 202 aa7.25□□□□□ -1.25
SMNDC1-201ENST00000369592 MT4P47944 62 aa7.21□□□□□ -1.26
SMNDC1-201ENST00000369592 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.26
SMNDC1-201ENST00000369592 Q1T7F1 81 aa7.1□□□□□ -1.27
SMNDC1-201ENST00000369592 KRTAP4-3Q9BYR4 195 aa7.1□□□□□ -1.27
SMNDC1-201ENST00000369592 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
SMNDC1-201ENST00000369592 KRTAP5-7Q6L8G8 165 aa7.07□□□□□ -1.28
SMNDC1-201ENST00000369592 V9GYY9 64 aa7.07□□□□□ -1.28
SMNDC1-201ENST00000369592 PSPHP1O15172 72 aa7.03□□□□□ -1.28
SMNDC1-201ENST00000369592 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
SMNDC1-201ENST00000369592 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
SMNDC1-201ENST00000369592 K7ERS5 55 aa6.93□□□□□ -1.3
SMNDC1-201ENST00000369592 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
SMNDC1-201ENST00000369592 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
SMNDC1-201ENST00000369592 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
SMNDC1-201ENST00000369592 A6NED7 52 aa6.76□□□□□ -1.33
SMNDC1-201ENST00000369592 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
SMNDC1-201ENST00000369592 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
SMNDC1-201ENST00000369592 PCP4P48539 62 aa6.62□□□□□ -1.35
SMNDC1-201ENST00000369592 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
SMNDC1-201ENST00000369592 ROMO1P60602 79 aa6.55□□□□□ -1.36
SMNDC1-201ENST00000369592 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
SMNDC1-201ENST00000369592 KRTAP20-2Q3LI61 65 aa6.53□□□□□ -1.36
SMNDC1-201ENST00000369592 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
SMNDC1-201ENST00000369592 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-201ENST00000369592 AHNAKQ09666 5890 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-201ENST00000369592 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
SMNDC1-201ENST00000369592 MT1AP04731 61 aa6.24□□□□□ -1.41
SMNDC1-201ENST00000369592 MUC5ACP98088 5654 aa6.22□□□□□ -1.41
SMNDC1-201ENST00000369592 KRTAP6-1Q3LI64 71 aa6.2□□□□□ -1.42
SMNDC1-201ENST00000369592 MUC5BQ9HC84 5762 aaPredicted RBP6.15□□□□□ -1.42
SMNDC1-201ENST00000369592 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
SMNDC1-201ENST00000369592 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
SMNDC1-201ENST00000369592 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
SMNDC1-201ENST00000369592 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.86□□□□□ -1.47
SMNDC1-201ENST00000369592 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
SMNDC1-201ENST00000369592 KRTAP5-11Q6L8G4 156 aa5.76□□□□□ -1.49
SMNDC1-201ENST00000369592 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
SMNDC1-201ENST00000369592 MT3P25713 68 aa5.67□□□□□ -1.5
SMNDC1-201ENST00000369592 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
SMNDC1-201ENST00000369592 KRTAP5-1Q6L8H4 278 aa5.47□□□□□ -1.53
SMNDC1-201ENST00000369592 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
SMNDC1-201ENST00000369592 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
SMNDC1-201ENST00000369592 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
SMNDC1-201ENST00000369592 KRTAP4-4Q9BYR3 166 aa4.91□□□□□ -1.62
SMNDC1-201ENST00000369592 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
SMNDC1-201ENST00000369592 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
SMNDC1-201ENST00000369592 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
SMNDC1-201ENST00000369592 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
SMNDC1-201ENST00000369592 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
SMNDC1-201ENST00000369592 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SMNDC1-201ENST00000369592 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
SMNDC1-201ENST00000369592 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
SMNDC1-201ENST00000369592 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
SMNDC1-201ENST00000369592 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
SMNDC1-201ENST00000369592 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
SMNDC1-201ENST00000369592 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
SMNDC1-201ENST00000369592 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
SMNDC1-201ENST00000369592 PRM1P04553 51 aa3.35□□□□□ -1.87
SMNDC1-201ENST00000369592 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
SMNDC1-201ENST00000369592 INE1O15225 51 aa2.85□□□□□ -1.95
SMNDC1-201ENST00000369592 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 59.7 ms