RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
CSDE1-204ENST00000369530 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
CSDE1-204ENST00000369530 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
CSDE1-204ENST00000369530 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
CSDE1-204ENST00000369530 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-204ENST00000369530 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
CSDE1-204ENST00000369530 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
CSDE1-204ENST00000369530 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
CSDE1-204ENST00000369530 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
CSDE1-204ENST00000369530 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
CSDE1-204ENST00000369530 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
CSDE1-204ENST00000369530 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
CSDE1-204ENST00000369530 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
CSDE1-204ENST00000369530 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
CSDE1-204ENST00000369530 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
CSDE1-204ENST00000369530 MT1EP04732 61 aa2.54□□□□□ -2
CSDE1-204ENST00000369530 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
CSDE1-204ENST00000369530 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
CSDE1-204ENST00000369530 LCE1DQ5T752 114 aa2.52□□□□□ -2.01
CSDE1-204ENST00000369530 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
CSDE1-204ENST00000369530 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
CSDE1-204ENST00000369530 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
CSDE1-204ENST00000369530 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
CSDE1-204ENST00000369530 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
CSDE1-204ENST00000369530 MT1LQ93083 61 aa2.41□□□□□ -2.02
CSDE1-204ENST00000369530 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
CSDE1-204ENST00000369530 SPRR2EP22531 72 aa2.39□□□□□ -2.03
CSDE1-204ENST00000369530 SPRR2BP35325 72 aa2.39□□□□□ -2.03
CSDE1-204ENST00000369530 SPRR2AP35326 72 aa2.39□□□□□ -2.03
CSDE1-204ENST00000369530 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
CSDE1-204ENST00000369530 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
CSDE1-204ENST00000369530 MT1MQ8N339 61 aa2.37□□□□□ -2.03
CSDE1-204ENST00000369530 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
CSDE1-204ENST00000369530 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
CSDE1-204ENST00000369530 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
CSDE1-204ENST00000369530 MT1GP13640 62 aa2.33□□□□□ -2.04
CSDE1-204ENST00000369530 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CSDE1-204ENST00000369530 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
CSDE1-204ENST00000369530 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
CSDE1-204ENST00000369530 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
CSDE1-204ENST00000369530 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
CSDE1-204ENST00000369530 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CSDE1-204ENST00000369530 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
CSDE1-204ENST00000369530 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
CSDE1-204ENST00000369530 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
CSDE1-204ENST00000369530 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-204ENST00000369530 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
CSDE1-204ENST00000369530 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
CSDE1-204ENST00000369530 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
CSDE1-204ENST00000369530 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
CSDE1-204ENST00000369530 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
CSDE1-204ENST00000369530 MT1AP04731 61 aa2.05□□□□□ -2.08
CSDE1-204ENST00000369530 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
CSDE1-204ENST00000369530 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
CSDE1-204ENST00000369530 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
CSDE1-204ENST00000369530 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CSDE1-204ENST00000369530 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
CSDE1-204ENST00000369530 PRM1P04553 51 aa1.96□□□□□ -2.1
CSDE1-204ENST00000369530 MT4P47944 62 aa1.94□□□□□ -2.1
CSDE1-204ENST00000369530 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CSDE1-204ENST00000369530 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
CSDE1-204ENST00000369530 MT3P25713 68 aa1.84□□□□□ -2.11
CSDE1-204ENST00000369530 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
CSDE1-204ENST00000369530 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
CSDE1-204ENST00000369530 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
CSDE1-204ENST00000369530 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
CSDE1-204ENST00000369530 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
CSDE1-204ENST00000369530 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
CSDE1-204ENST00000369530 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
CSDE1-204ENST00000369530 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CSDE1-204ENST00000369530 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CSDE1-204ENST00000369530 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 50.1 ms