RNA–Protein interactions for RNA: ENST00000368892.8

VPS72-202, Transcript of vacuolar protein sorting 72 homolog, humanhuman

APPRIS P1 TSL 1 (best)

Gene VPS72, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-202ENST00000368892 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
VPS72-202ENST00000368892 NEBP20929 6669 aa7.46□□□□□ -1.22
VPS72-202ENST00000368892 SPRR2EP22531 72 aa7.43□□□□□ -1.22
VPS72-202ENST00000368892 SPRR2BP35325 72 aa7.43□□□□□ -1.22
VPS72-202ENST00000368892 SPRR2AP35326 72 aa7.43□□□□□ -1.22
VPS72-202ENST00000368892 KRTAP19-3Q7Z4W3 81 aa7.37□□□□□ -1.23
VPS72-202ENST00000368892 MT1LQ93083 61 aa7.35□□□□□ -1.23
VPS72-202ENST00000368892 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
VPS72-202ENST00000368892 MT1GP13640 62 aa7.27□□□□□ -1.25
VPS72-202ENST00000368892 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
VPS72-202ENST00000368892 SPRR2DP22532 72 aa7.17□□□□□ -1.26
VPS72-202ENST00000368892 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
VPS72-202ENST00000368892 MT1MQ8N339 61 aa7.16□□□□□ -1.26
VPS72-202ENST00000368892 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
VPS72-202ENST00000368892 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
VPS72-202ENST00000368892 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
VPS72-202ENST00000368892 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
VPS72-202ENST00000368892 KRTAP20-1Q3LI63 56 aa6.96□□□□□ -1.29
VPS72-202ENST00000368892 DSTQ03001 7570 aaKnown RBP6.95□□□□□ -1.3
VPS72-202ENST00000368892 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
VPS72-202ENST00000368892 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
VPS72-202ENST00000368892 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
VPS72-202ENST00000368892 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
VPS72-202ENST00000368892 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
VPS72-202ENST00000368892 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
VPS72-202ENST00000368892 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
VPS72-202ENST00000368892 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
VPS72-202ENST00000368892 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
VPS72-202ENST00000368892 H3BS24 57 aa6.45□□□□□ -1.38
VPS72-202ENST00000368892 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
VPS72-202ENST00000368892 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
VPS72-202ENST00000368892 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
VPS72-202ENST00000368892 MT1AP04731 61 aa6.25□□□□□ -1.41
VPS72-202ENST00000368892 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
VPS72-202ENST00000368892 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
VPS72-202ENST00000368892 MT4P47944 62 aa6.21□□□□□ -1.42
VPS72-202ENST00000368892 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
VPS72-202ENST00000368892 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
VPS72-202ENST00000368892 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
VPS72-202ENST00000368892 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
VPS72-202ENST00000368892 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
VPS72-202ENST00000368892 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
VPS72-202ENST00000368892 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
VPS72-202ENST00000368892 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
VPS72-202ENST00000368892 A0A0A0MQY5 61 aa5.84□□□□□ -1.48
VPS72-202ENST00000368892 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
VPS72-202ENST00000368892 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
VPS72-202ENST00000368892 MT3P25713 68 aa5.69□□□□□ -1.5
VPS72-202ENST00000368892 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
VPS72-202ENST00000368892 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
VPS72-202ENST00000368892 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
VPS72-202ENST00000368892 INE1O15225 51 aa5.38□□□□□ -1.55
VPS72-202ENST00000368892 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
VPS72-202ENST00000368892 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
VPS72-202ENST00000368892 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
VPS72-202ENST00000368892 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
VPS72-202ENST00000368892 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.58
VPS72-202ENST00000368892 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
VPS72-202ENST00000368892 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
VPS72-202ENST00000368892 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
VPS72-202ENST00000368892 MUC5ACP98088 5654 aa4.9□□□□□ -1.62
VPS72-202ENST00000368892 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
VPS72-202ENST00000368892 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
VPS72-202ENST00000368892 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
VPS72-202ENST00000368892 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
VPS72-202ENST00000368892 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
VPS72-202ENST00000368892 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
VPS72-202ENST00000368892 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
VPS72-202ENST00000368892 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
VPS72-202ENST00000368892 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
VPS72-202ENST00000368892 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
VPS72-202ENST00000368892 PRM1P04553 51 aa4.07□□□□□ -1.76
VPS72-202ENST00000368892 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
VPS72-202ENST00000368892 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
VPS72-202ENST00000368892 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
VPS72-202ENST00000368892 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
VPS72-202ENST00000368892 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
VPS72-202ENST00000368892 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 156 ms