RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
TUBE1-201ENST00000368657 COA5Q86WW8 74 aa3.88□□□□□ -1.79
TUBE1-201ENST00000368657 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
TUBE1-201ENST00000368657 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
TUBE1-201ENST00000368657 COX7CP15954 63 aa3.87□□□□□ -1.79
TUBE1-201ENST00000368657 MT1GP13640 62 aa3.85□□□□□ -1.79
TUBE1-201ENST00000368657 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
TUBE1-201ENST00000368657 MT1EP04732 61 aa3.83□□□□□ -1.8
TUBE1-201ENST00000368657 SEC61GP60059 68 aa3.83□□□□□ -1.8
TUBE1-201ENST00000368657 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
TUBE1-201ENST00000368657 H7BZZ5 65 aa3.81□□□□□ -1.8
TUBE1-201ENST00000368657 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
TUBE1-201ENST00000368657 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
TUBE1-201ENST00000368657 SERP1Q9Y6X1 66 aa3.81□□□□□ -1.8
TUBE1-201ENST00000368657 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
TUBE1-201ENST00000368657 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
TUBE1-201ENST00000368657 A0A0D9SG42 100 aa3.77□□□□□ -1.81
TUBE1-201ENST00000368657 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
TUBE1-201ENST00000368657 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
TUBE1-201ENST00000368657 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
TUBE1-201ENST00000368657 A0A1B0GU33 70 aa3.74□□□□□ -1.81
TUBE1-201ENST00000368657 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
TUBE1-201ENST00000368657 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
TUBE1-201ENST00000368657 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
TUBE1-201ENST00000368657 MT1MQ8N339 61 aa3.71□□□□□ -1.82
TUBE1-201ENST00000368657 A0A1B0GU69 56 aa3.69□□□□□ -1.82
TUBE1-201ENST00000368657 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
TUBE1-201ENST00000368657 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
TUBE1-201ENST00000368657 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
TUBE1-201ENST00000368657 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
TUBE1-201ENST00000368657 SMIM26A0A096LP01 95 aa3.62□□□□□ -1.83
TUBE1-201ENST00000368657 A8MU10 97 aa3.61□□□□□ -1.83
TUBE1-201ENST00000368657 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
TUBE1-201ENST00000368657 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
TUBE1-201ENST00000368657 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
TUBE1-201ENST00000368657 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
TUBE1-201ENST00000368657 TMEM258P61165 79 aa3.55□□□□□ -1.84
TUBE1-201ENST00000368657 MT1LQ93083 61 aa3.53□□□□□ -1.84
TUBE1-201ENST00000368657 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
TUBE1-201ENST00000368657 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
TUBE1-201ENST00000368657 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
TUBE1-201ENST00000368657 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
TUBE1-201ENST00000368657 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
TUBE1-201ENST00000368657 UQCR11O14957 56 aa3.46□□□□□ -1.86
TUBE1-201ENST00000368657 TNP1P09430 55 aa3.46□□□□□ -1.86
TUBE1-201ENST00000368657 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
TUBE1-201ENST00000368657 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
TUBE1-201ENST00000368657 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
TUBE1-201ENST00000368657 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
TUBE1-201ENST00000368657 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
TUBE1-201ENST00000368657 PSPHP1O15172 72 aa3.38□□□□□ -1.87
TUBE1-201ENST00000368657 V9GYY9 64 aa3.36□□□□□ -1.87
TUBE1-201ENST00000368657 K7ERS5 55 aa3.35□□□□□ -1.87
TUBE1-201ENST00000368657 Q1T7F1 81 aa3.32□□□□□ -1.88
TUBE1-201ENST00000368657 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
TUBE1-201ENST00000368657 A6NED7 52 aa3.27□□□□□ -1.89
TUBE1-201ENST00000368657 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
TUBE1-201ENST00000368657 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
TUBE1-201ENST00000368657 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
TUBE1-201ENST00000368657 ROMO1P60602 79 aa3.1□□□□□ -1.91
TUBE1-201ENST00000368657 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
TUBE1-201ENST00000368657 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
TUBE1-201ENST00000368657 MT1AP04731 61 aa3□□□□□ -1.93
TUBE1-201ENST00000368657 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
TUBE1-201ENST00000368657 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
TUBE1-201ENST00000368657 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
TUBE1-201ENST00000368657 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
TUBE1-201ENST00000368657 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
TUBE1-201ENST00000368657 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
TUBE1-201ENST00000368657 LUZP6Q538Z0 58 aa2.54□□□□□ -2
TUBE1-201ENST00000368657 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
TUBE1-201ENST00000368657 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
TUBE1-201ENST00000368657 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TUBE1-201ENST00000368657 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
TUBE1-201ENST00000368657 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
TUBE1-201ENST00000368657 INE1O15225 51 aa1.6□□□□□ -2.15
TUBE1-201ENST00000368657 PRM1P04553 51 aa1.6□□□□□ -2.15
TUBE1-201ENST00000368657 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms