RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 SPRR2EP22531 72 aa10.84□□□□□ -0.67
ECHS1-201ENST00000368547 SPRR2BP35325 72 aa10.84□□□□□ -0.67
ECHS1-201ENST00000368547 SPRR2AP35326 72 aa10.84□□□□□ -0.67
ECHS1-201ENST00000368547 LCE1AQ5T7P2 110 aa10.81□□□□□ -0.68
ECHS1-201ENST00000368547 KRTAP20-1Q3LI63 56 aa10.66□□□□□ -0.7
ECHS1-201ENST00000368547 KRTAP15-1Q3LI76 137 aa10.63□□□□□ -0.71
ECHS1-201ENST00000368547 KRTAP19-3Q7Z4W3 81 aa10.61□□□□□ -0.71
ECHS1-201ENST00000368547 MT1LQ93083 61 aa10.55□□□□□ -0.72
ECHS1-201ENST00000368547 LCE5AQ5TCM9 118 aa10.51□□□□□ -0.73
ECHS1-201ENST00000368547 SPRR2DP22532 72 aa10.47□□□□□ -0.73
ECHS1-201ENST00000368547 MT1GP13640 62 aa10.45□□□□□ -0.74
ECHS1-201ENST00000368547 KRTAP2-3P0C7H8 128 aa10.4□□□□□ -0.74
ECHS1-201ENST00000368547 KRTAP2-4Q9BYR9 128 aa10.4□□□□□ -0.74
ECHS1-201ENST00000368547 KRTAP19-4Q3LI73 84 aa10.36□□□□□ -0.75
ECHS1-201ENST00000368547 MT1MQ8N339 61 aa10.3□□□□□ -0.76
ECHS1-201ENST00000368547 LCE3CQ5T5A8 94 aa10.15□□□□□ -0.79
ECHS1-201ENST00000368547 KRTAP4-7Q9BYR0 210 aa10.14□□□□□ -0.79
ECHS1-201ENST00000368547 LCE3BQ5TA77 95 aa10.11□□□□□ -0.79
ECHS1-201ENST00000368547 SPRR5A0A1B0GTR4 108 aa10.09□□□□□ -0.79
ECHS1-201ENST00000368547 KRTAP2-2Q9BYT5 123 aa10.09□□□□□ -0.79
ECHS1-201ENST00000368547 KRTAP2-1Q9BYU5 128 aa10.09□□□□□ -0.79
ECHS1-201ENST00000368547 KRTAP4-3Q9BYR4 195 aa10.07□□□□□ -0.8
ECHS1-201ENST00000368547 DSTQ03001 7570 aaKnown RBP10.05□□□□□ -0.8
ECHS1-201ENST00000368547 LUZP6Q538Z0 58 aa9.65□□□□□ -0.86
ECHS1-201ENST00000368547 LOC100996750A0A140TA64 210 aa9.55□□□□□ -0.88
ECHS1-201ENST00000368547 KRTAP9-6A8MVA2 160 aa9.55□□□□□ -0.88
ECHS1-201ENST00000368547 KRTAP5-5Q701N2 237 aaPredicted RBP9.35□□□□□ -0.91
ECHS1-201ENST00000368547 KRTAP5-4Q6L8H1 288 aa9.28□□□□□ -0.92
ECHS1-201ENST00000368547 LCE4AQ5TA78 99 aa9.27□□□□□ -0.92
ECHS1-201ENST00000368547 NDUFAF8A1L188 74 aa9.26□□□□□ -0.93
ECHS1-201ENST00000368547 KRTAP4-9Q9BYQ8 210 aa9.24□□□□□ -0.93
ECHS1-201ENST00000368547 MT4P47944 62 aa9.1□□□□□ -0.95
ECHS1-201ENST00000368547 LCE1DQ5T752 114 aa9.07□□□□□ -0.96
ECHS1-201ENST00000368547 GPR98Q8WXG9 6306 aa9.06□□□□□ -0.96
ECHS1-201ENST00000368547 HMCN1Q96RW7 5635 aa9.03□□□□□ -0.96
ECHS1-201ENST00000368547 MT1AP04731 61 aa8.98□□□□□ -0.97
ECHS1-201ENST00000368547 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
ECHS1-201ENST00000368547 KRTAP6-1Q3LI64 71 aa8.91□□□□□ -0.98
ECHS1-201ENST00000368547 KRTAP12-4P60329 112 aa8.88□□□□□ -0.99
ECHS1-201ENST00000368547 SYNE1Q8NF91 8797 aaKnown RBP8.88□□□□□ -0.99
ECHS1-201ENST00000368547 KRTAP20-2Q3LI61 65 aa8.72□□□□□ -1.01
ECHS1-201ENST00000368547 AHNAK2Q8IVF2 5795 aa8.64□□□□□ -1.03
ECHS1-201ENST00000368547 KRTAP9-4Q9BYQ2 154 aa8.59□□□□□ -1.03
ECHS1-201ENST00000368547 KRTAP5-3Q6L8H2 238 aa8.42□□□□□ -1.06
ECHS1-201ENST00000368547 KRTAP5-10Q6L8G5 202 aa8.36□□□□□ -1.07
ECHS1-201ENST00000368547 KRTAP6-2Q3LI66 62 aa8.33□□□□□ -1.08
ECHS1-201ENST00000368547 KRTAP5-2Q701N4 177 aa8.29□□□□□ -1.08
ECHS1-201ENST00000368547 MT3P25713 68 aa8.17□□□□□ -1.1
ECHS1-201ENST00000368547 A0A0A0MQY5 61 aa8.16□□□□□ -1.1
ECHS1-201ENST00000368547 KRTAP5-7Q6L8G8 165 aa8.01□□□□□ -1.13
ECHS1-201ENST00000368547 H3BS24 57 aa7.83□□□□□ -1.16
ECHS1-201ENST00000368547 INE1O15225 51 aa7.74□□□□□ -1.17
ECHS1-201ENST00000368547 KRTAP4-11Q9BYQ6 195 aa7.74□□□□□ -1.17
ECHS1-201ENST00000368547 OBSCNQ5VST9 7968 aa7.72□□□□□ -1.17
ECHS1-201ENST00000368547 LCE3DQ9BYE3 92 aa7.6□□□□□ -1.19
ECHS1-201ENST00000368547 KRTAP5-8O75690 187 aa7.46□□□□□ -1.21
ECHS1-201ENST00000368547 LCE3EQ5T5B0 92 aa7.38□□□□□ -1.23
ECHS1-201ENST00000368547 KRTAP5-1Q6L8H4 278 aa7.28□□□□□ -1.24
ECHS1-201ENST00000368547 LCE1EQ5T753 118 aa7.27□□□□□ -1.25
ECHS1-201ENST00000368547 MUC5BQ9HC84 5762 aaPredicted RBP7.15□□□□□ -1.26
ECHS1-201ENST00000368547 AHNAKQ09666 5890 aaKnown RBP7.1□□□□□ -1.27
ECHS1-201ENST00000368547 MUC5ACP98088 5654 aa7.07□□□□□ -1.28
ECHS1-201ENST00000368547 KRTAP9-9Q9BYP9 154 aa6.98□□□□□ -1.29
ECHS1-201ENST00000368547 LCE1BQ5T7P3 118 aa6.83□□□□□ -1.32
ECHS1-201ENST00000368547 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
ECHS1-201ENST00000368547 LCE1CQ5T751 118 aa6.76□□□□□ -1.33
ECHS1-201ENST00000368547 PRM1P04553 51 aa6.34□□□□□ -1.39
ECHS1-201ENST00000368547 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.25□□□□□ -1.41
ECHS1-201ENST00000368547 KRTAP5-11Q6L8G4 156 aa6.03□□□□□ -1.44
ECHS1-201ENST00000368547 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
ECHS1-201ENST00000368547 KRTAP21-2Q3LI59 83 aa5.85□□□□□ -1.47
ECHS1-201ENST00000368547 LCE1FQ5T754 118 aa5.63□□□□□ -1.51
ECHS1-201ENST00000368547 KRTAP4-4Q9BYR3 166 aa5.26□□□□□ -1.57
ECHS1-201ENST00000368547 PHGR1C9JFL3 82 aa5.19□□□□□ -1.58
ECHS1-201ENST00000368547 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
ECHS1-201ENST00000368547 KRTAP21-1Q3LI58 79 aa3.89□□□□□ -1.79
ECHS1-201ENST00000368547 MUC16Q8WXI7 14507 aa3.31□□□□□ -1.88
Retrieved 77 of 20,778 RNA–protein pairs in 25 ms