RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 A0A1B0GU33 70 aa5.7□□□□□ -1.5
CKS1B-202ENST00000368436 MT4P47944 62 aa5.68□□□□□ -1.5
CKS1B-202ENST00000368436 MT1LQ93083 61 aa5.68□□□□□ -1.5
CKS1B-202ENST00000368436 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.5
CKS1B-202ENST00000368436 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
CKS1B-202ENST00000368436 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
CKS1B-202ENST00000368436 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
CKS1B-202ENST00000368436 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
CKS1B-202ENST00000368436 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
CKS1B-202ENST00000368436 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
CKS1B-202ENST00000368436 SMIM26A0A096LP01 95 aa5.53□□□□□ -1.52
CKS1B-202ENST00000368436 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
CKS1B-202ENST00000368436 A8MU10 97 aa5.49□□□□□ -1.53
CKS1B-202ENST00000368436 TNP1P09430 55 aa5.49□□□□□ -1.53
CKS1B-202ENST00000368436 COX7CP15954 63 aa5.49□□□□□ -1.53
CKS1B-202ENST00000368436 H7BZZ5 65 aa5.48□□□□□ -1.53
CKS1B-202ENST00000368436 A0A1B0GU69 56 aa5.47□□□□□ -1.53
CKS1B-202ENST00000368436 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CKS1B-202ENST00000368436 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
CKS1B-202ENST00000368436 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
CKS1B-202ENST00000368436 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-202ENST00000368436 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
CKS1B-202ENST00000368436 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
CKS1B-202ENST00000368436 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
CKS1B-202ENST00000368436 LINC01558Q9Y6Z2 57 aa5.15□□□□□ -1.59
CKS1B-202ENST00000368436 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
CKS1B-202ENST00000368436 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
CKS1B-202ENST00000368436 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
CKS1B-202ENST00000368436 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
CKS1B-202ENST00000368436 CCDC179H3BU77 68 aa5.06□□□□□ -1.6
CKS1B-202ENST00000368436 UQCR11O14957 56 aa5.06□□□□□ -1.6
CKS1B-202ENST00000368436 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
CKS1B-202ENST00000368436 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
CKS1B-202ENST00000368436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-202ENST00000368436 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CKS1B-202ENST00000368436 K7ERS5 55 aa4.85□□□□□ -1.63
CKS1B-202ENST00000368436 TMEM258P61165 79 aa4.85□□□□□ -1.63
CKS1B-202ENST00000368436 MT1AP04731 61 aa4.83□□□□□ -1.64
CKS1B-202ENST00000368436 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
CKS1B-202ENST00000368436 V9GYY9 64 aa4.78□□□□□ -1.64
CKS1B-202ENST00000368436 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CKS1B-202ENST00000368436 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
CKS1B-202ENST00000368436 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
CKS1B-202ENST00000368436 PSPHP1O15172 72 aa4.67□□□□□ -1.66
CKS1B-202ENST00000368436 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
CKS1B-202ENST00000368436 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
CKS1B-202ENST00000368436 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
CKS1B-202ENST00000368436 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
CKS1B-202ENST00000368436 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
CKS1B-202ENST00000368436 Q1T7F1 81 aa4.62□□□□□ -1.67
CKS1B-202ENST00000368436 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
CKS1B-202ENST00000368436 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
CKS1B-202ENST00000368436 MT3P25713 68 aa4.57□□□□□ -1.68
CKS1B-202ENST00000368436 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-202ENST00000368436 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
CKS1B-202ENST00000368436 ROMO1P60602 79 aa4.5□□□□□ -1.69
CKS1B-202ENST00000368436 A6NED7 52 aa4.49□□□□□ -1.69
CKS1B-202ENST00000368436 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
CKS1B-202ENST00000368436 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
CKS1B-202ENST00000368436 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
CKS1B-202ENST00000368436 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
CKS1B-202ENST00000368436 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CKS1B-202ENST00000368436 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
CKS1B-202ENST00000368436 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
CKS1B-202ENST00000368436 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
CKS1B-202ENST00000368436 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
CKS1B-202ENST00000368436 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
CKS1B-202ENST00000368436 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
CKS1B-202ENST00000368436 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CKS1B-202ENST00000368436 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
CKS1B-202ENST00000368436 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
CKS1B-202ENST00000368436 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
CKS1B-202ENST00000368436 INE1O15225 51 aa3□□□□□ -1.93
CKS1B-202ENST00000368436 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CKS1B-202ENST00000368436 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CKS1B-202ENST00000368436 PRM1P04553 51 aa2.27□□□□□ -2.05
CKS1B-202ENST00000368436 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 114 ms