RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
FDPS-202ENST00000368356 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
FDPS-202ENST00000368356 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
FDPS-202ENST00000368356 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
FDPS-202ENST00000368356 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
FDPS-202ENST00000368356 MT1EP04732 61 aa5.77□□□□□ -1.49
FDPS-202ENST00000368356 SPRR2DP22532 72 aa5.76□□□□□ -1.49
FDPS-202ENST00000368356 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
FDPS-202ENST00000368356 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
FDPS-202ENST00000368356 MT1LQ93083 61 aa5.62□□□□□ -1.51
FDPS-202ENST00000368356 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
FDPS-202ENST00000368356 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
FDPS-202ENST00000368356 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
FDPS-202ENST00000368356 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
FDPS-202ENST00000368356 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
FDPS-202ENST00000368356 MT1GP13640 62 aa5.56□□□□□ -1.52
FDPS-202ENST00000368356 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
FDPS-202ENST00000368356 MT1MQ8N339 61 aa5.46□□□□□ -1.54
FDPS-202ENST00000368356 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
FDPS-202ENST00000368356 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
FDPS-202ENST00000368356 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
FDPS-202ENST00000368356 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
FDPS-202ENST00000368356 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
FDPS-202ENST00000368356 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
FDPS-202ENST00000368356 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
FDPS-202ENST00000368356 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
FDPS-202ENST00000368356 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
FDPS-202ENST00000368356 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
FDPS-202ENST00000368356 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
FDPS-202ENST00000368356 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
FDPS-202ENST00000368356 MT4P47944 62 aa5□□□□□ -1.61
FDPS-202ENST00000368356 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
FDPS-202ENST00000368356 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
FDPS-202ENST00000368356 MT1AP04731 61 aa4.79□□□□□ -1.64
FDPS-202ENST00000368356 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
FDPS-202ENST00000368356 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
FDPS-202ENST00000368356 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
FDPS-202ENST00000368356 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
FDPS-202ENST00000368356 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
FDPS-202ENST00000368356 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
FDPS-202ENST00000368356 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
FDPS-202ENST00000368356 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
FDPS-202ENST00000368356 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
FDPS-202ENST00000368356 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
FDPS-202ENST00000368356 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
FDPS-202ENST00000368356 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
FDPS-202ENST00000368356 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
FDPS-202ENST00000368356 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
FDPS-202ENST00000368356 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
FDPS-202ENST00000368356 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
FDPS-202ENST00000368356 MT3P25713 68 aa4.35□□□□□ -1.71
FDPS-202ENST00000368356 H3BS24 57 aa4.32□□□□□ -1.72
FDPS-202ENST00000368356 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
FDPS-202ENST00000368356 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
FDPS-202ENST00000368356 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
FDPS-202ENST00000368356 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
FDPS-202ENST00000368356 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
FDPS-202ENST00000368356 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
FDPS-202ENST00000368356 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
FDPS-202ENST00000368356 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
FDPS-202ENST00000368356 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
FDPS-202ENST00000368356 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
FDPS-202ENST00000368356 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
FDPS-202ENST00000368356 AHNAKQ09666 5890 aaKnown RBP3.79□□□□□ -1.8
FDPS-202ENST00000368356 INE1O15225 51 aa3.66□□□□□ -1.82
FDPS-202ENST00000368356 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
FDPS-202ENST00000368356 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
FDPS-202ENST00000368356 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
FDPS-202ENST00000368356 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
FDPS-202ENST00000368356 PRM1P04553 51 aa3.2□□□□□ -1.9
FDPS-202ENST00000368356 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
FDPS-202ENST00000368356 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
FDPS-202ENST00000368356 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
FDPS-202ENST00000368356 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
FDPS-202ENST00000368356 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
FDPS-202ENST00000368356 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
FDPS-202ENST00000368356 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 60.7 ms