RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 K7ERS5 55 aa8.01□□□□□ -1.13
ECHDC1-203ENST00000368291 MT1LQ93083 61 aa8.01□□□□□ -1.13
ECHDC1-203ENST00000368291 A6NED7 52 aa7.97□□□□□ -1.13
ECHDC1-203ENST00000368291 DSTQ03001 7570 aaKnown RBP7.96□□□□□ -1.13
ECHDC1-203ENST00000368291 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
ECHDC1-203ENST00000368291 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
ECHDC1-203ENST00000368291 MT1MQ8N339 61 aa7.92□□□□□ -1.14
ECHDC1-203ENST00000368291 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
ECHDC1-203ENST00000368291 KRTAP4-3Q9BYR4 195 aa7.75□□□□□ -1.17
ECHDC1-203ENST00000368291 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
ECHDC1-203ENST00000368291 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
ECHDC1-203ENST00000368291 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
ECHDC1-203ENST00000368291 KRTAP23-1A1A580 65 aa7.67□□□□□ -1.18
ECHDC1-203ENST00000368291 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
ECHDC1-203ENST00000368291 ROMO1P60602 79 aa7.58□□□□□ -1.2
ECHDC1-203ENST00000368291 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
ECHDC1-203ENST00000368291 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
ECHDC1-203ENST00000368291 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
ECHDC1-203ENST00000368291 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
ECHDC1-203ENST00000368291 KRTAP5-4Q6L8H1 288 aa7.43□□□□□ -1.22
ECHDC1-203ENST00000368291 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
ECHDC1-203ENST00000368291 BRK1Q8WUW1 75 aa7.38□□□□□ -1.23
ECHDC1-203ENST00000368291 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
ECHDC1-203ENST00000368291 MT4P47944 62 aa7.35□□□□□ -1.23
ECHDC1-203ENST00000368291 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
ECHDC1-203ENST00000368291 KRTAP5-5Q701N2 237 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-203ENST00000368291 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
ECHDC1-203ENST00000368291 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
ECHDC1-203ENST00000368291 GPR98Q8WXG9 6306 aa7.01□□□□□ -1.29
ECHDC1-203ENST00000368291 PMAIP1Q13794 54 aa6.99□□□□□ -1.29
ECHDC1-203ENST00000368291 SYNE1Q8NF91 8797 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-203ENST00000368291 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
ECHDC1-203ENST00000368291 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
ECHDC1-203ENST00000368291 AHNAK2Q8IVF2 5795 aa6.94□□□□□ -1.3
ECHDC1-203ENST00000368291 KRTAP12-4P60329 112 aa6.94□□□□□ -1.3
ECHDC1-203ENST00000368291 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
ECHDC1-203ENST00000368291 MT1AP04731 61 aa6.82□□□□□ -1.32
ECHDC1-203ENST00000368291 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
ECHDC1-203ENST00000368291 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
ECHDC1-203ENST00000368291 KRTAP6-1Q3LI64 71 aa6.78□□□□□ -1.32
ECHDC1-203ENST00000368291 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
ECHDC1-203ENST00000368291 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
ECHDC1-203ENST00000368291 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
ECHDC1-203ENST00000368291 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
ECHDC1-203ENST00000368291 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
ECHDC1-203ENST00000368291 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
ECHDC1-203ENST00000368291 KRTAP5-7Q6L8G8 165 aa6.47□□□□□ -1.37
ECHDC1-203ENST00000368291 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
ECHDC1-203ENST00000368291 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
ECHDC1-203ENST00000368291 MT3P25713 68 aa6.19□□□□□ -1.42
ECHDC1-203ENST00000368291 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
ECHDC1-203ENST00000368291 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
ECHDC1-203ENST00000368291 H3BS24 57 aa6.07□□□□□ -1.44
ECHDC1-203ENST00000368291 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.45
ECHDC1-203ENST00000368291 KRTAP5-1Q6L8H4 278 aa5.84□□□□□ -1.47
ECHDC1-203ENST00000368291 LCE1EQ5T753 118 aa5.65□□□□□ -1.51
ECHDC1-203ENST00000368291 MUC5ACP98088 5654 aa5.64□□□□□ -1.51
ECHDC1-203ENST00000368291 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-203ENST00000368291 AHNAKQ09666 5890 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-203ENST00000368291 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
ECHDC1-203ENST00000368291 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
ECHDC1-203ENST00000368291 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
ECHDC1-203ENST00000368291 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
ECHDC1-203ENST00000368291 LCE1CQ5T751 118 aa5.25□□□□□ -1.57
ECHDC1-203ENST00000368291 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
ECHDC1-203ENST00000368291 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-203ENST00000368291 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
ECHDC1-203ENST00000368291 A0A0A0MQY5 61 aa4.65□□□□□ -1.66
ECHDC1-203ENST00000368291 LCE1FQ5T754 118 aa4.53□□□□□ -1.69
ECHDC1-203ENST00000368291 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
ECHDC1-203ENST00000368291 INE1O15225 51 aa4.4□□□□□ -1.71
ECHDC1-203ENST00000368291 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
ECHDC1-203ENST00000368291 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
ECHDC1-203ENST00000368291 PRM1P04553 51 aa3.9□□□□□ -1.78
ECHDC1-203ENST00000368291 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
ECHDC1-203ENST00000368291 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
ECHDC1-203ENST00000368291 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms