RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
USF1-202ENST00000368020 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
USF1-202ENST00000368020 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
USF1-202ENST00000368020 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
USF1-202ENST00000368020 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
USF1-202ENST00000368020 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
USF1-202ENST00000368020 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
USF1-202ENST00000368020 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
USF1-202ENST00000368020 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
USF1-202ENST00000368020 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
USF1-202ENST00000368020 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
USF1-202ENST00000368020 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
USF1-202ENST00000368020 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
USF1-202ENST00000368020 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
USF1-202ENST00000368020 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
USF1-202ENST00000368020 INE1O15225 51 aa5.03□□□□□ -1.6
USF1-202ENST00000368020 KMT2DO14686 5537 aa5.03□□□□□ -1.6
USF1-202ENST00000368020 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
USF1-202ENST00000368020 MT1EP04732 61 aa4.96□□□□□ -1.62
USF1-202ENST00000368020 MT1LQ93083 61 aa4.92□□□□□ -1.62
USF1-202ENST00000368020 SPRR2FQ96RM1 72 aa4.91□□□□□ -1.62
USF1-202ENST00000368020 NEBP20929 6669 aa4.9□□□□□ -1.63
USF1-202ENST00000368020 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
USF1-202ENST00000368020 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
USF1-202ENST00000368020 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
USF1-202ENST00000368020 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
USF1-202ENST00000368020 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
USF1-202ENST00000368020 MT1GP13640 62 aa4.73□□□□□ -1.65
USF1-202ENST00000368020 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
USF1-202ENST00000368020 SPRR2EP22531 72 aa4.71□□□□□ -1.66
USF1-202ENST00000368020 SPRR2BP35325 72 aa4.71□□□□□ -1.66
USF1-202ENST00000368020 SPRR2AP35326 72 aa4.71□□□□□ -1.66
USF1-202ENST00000368020 MT1MQ8N339 61 aa4.65□□□□□ -1.67
USF1-202ENST00000368020 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
USF1-202ENST00000368020 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
USF1-202ENST00000368020 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
USF1-202ENST00000368020 SPRR2DP22532 72 aa4.55□□□□□ -1.68
USF1-202ENST00000368020 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
USF1-202ENST00000368020 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
USF1-202ENST00000368020 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
USF1-202ENST00000368020 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
USF1-202ENST00000368020 MT1AP04731 61 aa4.2□□□□□ -1.74
USF1-202ENST00000368020 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
USF1-202ENST00000368020 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
USF1-202ENST00000368020 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
USF1-202ENST00000368020 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
USF1-202ENST00000368020 KRTAP12-4P60329 112 aa4□□□□□ -1.77
USF1-202ENST00000368020 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
USF1-202ENST00000368020 MT4P47944 62 aa3.95□□□□□ -1.78
USF1-202ENST00000368020 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
USF1-202ENST00000368020 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
USF1-202ENST00000368020 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
USF1-202ENST00000368020 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
USF1-202ENST00000368020 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
USF1-202ENST00000368020 MT3P25713 68 aa3.81□□□□□ -1.8
USF1-202ENST00000368020 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
USF1-202ENST00000368020 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
USF1-202ENST00000368020 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
USF1-202ENST00000368020 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
USF1-202ENST00000368020 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
USF1-202ENST00000368020 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
USF1-202ENST00000368020 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
USF1-202ENST00000368020 PRM1P04553 51 aa3.48□□□□□ -1.85
USF1-202ENST00000368020 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
USF1-202ENST00000368020 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
USF1-202ENST00000368020 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
USF1-202ENST00000368020 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
USF1-202ENST00000368020 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
USF1-202ENST00000368020 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
USF1-202ENST00000368020 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
USF1-202ENST00000368020 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
USF1-202ENST00000368020 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
USF1-202ENST00000368020 LCE1FQ5T754 118 aa2.53□□□□□ -2
USF1-202ENST00000368020 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
USF1-202ENST00000368020 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
USF1-202ENST00000368020 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
USF1-202ENST00000368020 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 78.7 ms