RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
SMG7-203ENST00000367538 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
SMG7-203ENST00000367538 K7ERU9 68 aa6.14□□□□□ -1.43
SMG7-203ENST00000367538 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
SMG7-203ENST00000367538 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
SMG7-203ENST00000367538 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
SMG7-203ENST00000367538 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
SMG7-203ENST00000367538 A8MU10 97 aa6.06□□□□□ -1.44
SMG7-203ENST00000367538 A0A1B0GU69 56 aa6.03□□□□□ -1.44
SMG7-203ENST00000367538 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
SMG7-203ENST00000367538 H7BZZ5 65 aa5.88□□□□□ -1.47
SMG7-203ENST00000367538 COX7CP15954 63 aa5.86□□□□□ -1.47
SMG7-203ENST00000367538 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
SMG7-203ENST00000367538 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SMG7-203ENST00000367538 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
SMG7-203ENST00000367538 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
SMG7-203ENST00000367538 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
SMG7-203ENST00000367538 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
SMG7-203ENST00000367538 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
SMG7-203ENST00000367538 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
SMG7-203ENST00000367538 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
SMG7-203ENST00000367538 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
SMG7-203ENST00000367538 MT1AP04731 61 aa5.59□□□□□ -1.51
SMG7-203ENST00000367538 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
SMG7-203ENST00000367538 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
SMG7-203ENST00000367538 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
SMG7-203ENST00000367538 UQCR11O14957 56 aa5.54□□□□□ -1.52
SMG7-203ENST00000367538 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
SMG7-203ENST00000367538 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
SMG7-203ENST00000367538 ATP5EP56381 51 aaPredicted RBP5.46□□□□□ -1.54
SMG7-203ENST00000367538 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
SMG7-203ENST00000367538 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
SMG7-203ENST00000367538 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
SMG7-203ENST00000367538 K7ERS5 55 aa5.39□□□□□ -1.55
SMG7-203ENST00000367538 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
SMG7-203ENST00000367538 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
SMG7-203ENST00000367538 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
SMG7-203ENST00000367538 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
SMG7-203ENST00000367538 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
SMG7-203ENST00000367538 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
SMG7-203ENST00000367538 MT3P25713 68 aa5.15□□□□□ -1.59
SMG7-203ENST00000367538 TMEM258P61165 79 aa5.11□□□□□ -1.59
SMG7-203ENST00000367538 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
SMG7-203ENST00000367538 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
SMG7-203ENST00000367538 V9GYY9 64 aa4.98□□□□□ -1.61
SMG7-203ENST00000367538 Q1T7F1 81 aa4.97□□□□□ -1.61
SMG7-203ENST00000367538 PSPHP1O15172 72 aa4.95□□□□□ -1.62
SMG7-203ENST00000367538 ROMO1P60602 79 aa4.89□□□□□ -1.63
SMG7-203ENST00000367538 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SMG7-203ENST00000367538 A6NED7 52 aa4.79□□□□□ -1.64
SMG7-203ENST00000367538 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
SMG7-203ENST00000367538 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
SMG7-203ENST00000367538 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
SMG7-203ENST00000367538 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
SMG7-203ENST00000367538 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
SMG7-203ENST00000367538 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
SMG7-203ENST00000367538 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
SMG7-203ENST00000367538 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SMG7-203ENST00000367538 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
SMG7-203ENST00000367538 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
SMG7-203ENST00000367538 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SMG7-203ENST00000367538 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
SMG7-203ENST00000367538 PCP4P48539 62 aa3.52□□□□□ -1.85
SMG7-203ENST00000367538 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SMG7-203ENST00000367538 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SMG7-203ENST00000367538 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
SMG7-203ENST00000367538 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
SMG7-203ENST00000367538 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SMG7-203ENST00000367538 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
SMG7-203ENST00000367538 H3BS24 57 aa2.74□□□□□ -1.97
SMG7-203ENST00000367538 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
SMG7-203ENST00000367538 SVIPQ8NHG7 77 aa2.58□□□□□ -2
SMG7-203ENST00000367538 PRO0628Q9UI54 55 aa2.58□□□□□ -2
SMG7-203ENST00000367538 PRM1P04553 51 aa2.44□□□□□ -2.02
SMG7-203ENST00000367538 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
SMG7-203ENST00000367538 NDUFAF8A1L188 74 aa1.7□□□□□ -2.14
SMG7-203ENST00000367538 INE1O15225 51 aa1.32□□□□□ -2.2
SMG7-203ENST00000367538 A0A0A0MQY5 61 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms