RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
NSL1-202ENST00000366977 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
NSL1-202ENST00000366977 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
NSL1-202ENST00000366977 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
NSL1-202ENST00000366977 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
NSL1-202ENST00000366977 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
NSL1-202ENST00000366977 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
NSL1-202ENST00000366977 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
NSL1-202ENST00000366977 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
NSL1-202ENST00000366977 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
NSL1-202ENST00000366977 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
NSL1-202ENST00000366977 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
NSL1-202ENST00000366977 MT1EP04732 61 aa3.83□□□□□ -1.8
NSL1-202ENST00000366977 MT1LQ93083 61 aa3.83□□□□□ -1.8
NSL1-202ENST00000366977 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
NSL1-202ENST00000366977 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
NSL1-202ENST00000366977 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
NSL1-202ENST00000366977 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
NSL1-202ENST00000366977 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
NSL1-202ENST00000366977 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
NSL1-202ENST00000366977 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.82
NSL1-202ENST00000366977 MT1GP13640 62 aa3.65□□□□□ -1.83
NSL1-202ENST00000366977 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
NSL1-202ENST00000366977 MT1MQ8N339 61 aa3.59□□□□□ -1.84
NSL1-202ENST00000366977 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
NSL1-202ENST00000366977 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
NSL1-202ENST00000366977 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
NSL1-202ENST00000366977 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
NSL1-202ENST00000366977 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
NSL1-202ENST00000366977 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
NSL1-202ENST00000366977 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
NSL1-202ENST00000366977 NEBP20929 6669 aa3.43□□□□□ -1.86
NSL1-202ENST00000366977 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
NSL1-202ENST00000366977 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
NSL1-202ENST00000366977 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
NSL1-202ENST00000366977 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
NSL1-202ENST00000366977 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
NSL1-202ENST00000366977 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
NSL1-202ENST00000366977 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
NSL1-202ENST00000366977 SPRR2EP22531 72 aa3.25□□□□□ -1.89
NSL1-202ENST00000366977 SPRR2BP35325 72 aa3.25□□□□□ -1.89
NSL1-202ENST00000366977 SPRR2AP35326 72 aa3.25□□□□□ -1.89
NSL1-202ENST00000366977 MT1AP04731 61 aa3.16□□□□□ -1.9
NSL1-202ENST00000366977 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
NSL1-202ENST00000366977 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
NSL1-202ENST00000366977 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
NSL1-202ENST00000366977 SPRR2DP22532 72 aa3.12□□□□□ -1.91
NSL1-202ENST00000366977 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
NSL1-202ENST00000366977 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
NSL1-202ENST00000366977 PRM1P04553 51 aa2.99□□□□□ -1.93
NSL1-202ENST00000366977 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
NSL1-202ENST00000366977 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
NSL1-202ENST00000366977 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
NSL1-202ENST00000366977 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
NSL1-202ENST00000366977 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
NSL1-202ENST00000366977 MT3P25713 68 aa2.82□□□□□ -1.96
NSL1-202ENST00000366977 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
NSL1-202ENST00000366977 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
NSL1-202ENST00000366977 MT4P47944 62 aa2.76□□□□□ -1.97
NSL1-202ENST00000366977 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
NSL1-202ENST00000366977 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
NSL1-202ENST00000366977 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
NSL1-202ENST00000366977 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
NSL1-202ENST00000366977 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
NSL1-202ENST00000366977 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
NSL1-202ENST00000366977 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
NSL1-202ENST00000366977 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
NSL1-202ENST00000366977 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
NSL1-202ENST00000366977 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
NSL1-202ENST00000366977 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
NSL1-202ENST00000366977 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
NSL1-202ENST00000366977 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
NSL1-202ENST00000366977 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
NSL1-202ENST00000366977 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
NSL1-202ENST00000366977 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
NSL1-202ENST00000366977 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
NSL1-202ENST00000366977 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 154.8 ms