RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 TMEM258P61165 79 aa1.27□□□□□ -2.21
RNU4-35P-201ENST00000362588 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
RNU4-35P-201ENST00000362588 PRR15LQ9BU68 103 aa1.27□□□□□ -2.21
RNU4-35P-201ENST00000362588 TNP1P09430 55 aa1.25□□□□□ -2.21
RNU4-35P-201ENST00000362588 MT1LQ93083 61 aa1.25□□□□□ -2.21
RNU4-35P-201ENST00000362588 KRTAP4-3Q9BYR4 195 aa1.25□□□□□ -2.21
RNU4-35P-201ENST00000362588 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
RNU4-35P-201ENST00000362588 MT1MQ8N339 61 aa1.24□□□□□ -2.21
RNU4-35P-201ENST00000362588 UQCR11O14957 56 aa1.23□□□□□ -2.21
RNU4-35P-201ENST00000362588 PSPHP1O15172 72 aa1.23□□□□□ -2.21
RNU4-35P-201ENST00000362588 MT1GP13640 62 aa1.23□□□□□ -2.21
RNU4-35P-201ENST00000362588 LCE4AQ5TA78 99 aa1.23□□□□□ -2.21
RNU4-35P-201ENST00000362588 MIR22HGQ0VDD5 57 aa1.22□□□□□ -2.21
RNU4-35P-201ENST00000362588 PP632Q6XCG6 107 aa1.21□□□□□ -2.22
RNU4-35P-201ENST00000362588 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
RNU4-35P-201ENST00000362588 MT4P47944 62 aa1.19□□□□□ -2.22
RNU4-35P-201ENST00000362588 Q1T7F1 81 aa1.19□□□□□ -2.22
RNU4-35P-201ENST00000362588 V9GYY9 64 aa1.18□□□□□ -2.22
RNU4-35P-201ENST00000362588 A6NED7 52 aa1.17□□□□□ -2.22
RNU4-35P-201ENST00000362588 KRTAP25-1Q3LHN0 102 aa1.17□□□□□ -2.22
RNU4-35P-201ENST00000362588 K7ERS5 55 aa1.16□□□□□ -2.22
RNU4-35P-201ENST00000362588 PCP4P48539 62 aa1.16□□□□□ -2.22
RNU4-35P-201ENST00000362588 KRTAP5-4Q6L8H1 288 aa1.15□□□□□ -2.23
RNU4-35P-201ENST00000362588 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
RNU4-35P-201ENST00000362588 CDC42SE1Q9NRR8 79 aa1.13□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP15-1Q3LI76 137 aa1.12□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP5-5Q701N2 237 aaPredicted RBP1.12□□□□□ -2.23
RNU4-35P-201ENST00000362588 ROMO1P60602 79 aa1.11□□□□□ -2.23
RNU4-35P-201ENST00000362588 RPS28P62857 69 aaKnown RBP1.11□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
RNU4-35P-201ENST00000362588 LCE3CQ5T5A8 94 aa1.1□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
RNU4-35P-201ENST00000362588 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP23-1A1A580 65 aa1.09□□□□□ -2.23
RNU4-35P-201ENST00000362588 KRTAP9-6A8MVA2 160 aa1.08□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
RNU4-35P-201ENST00000362588 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
RNU4-35P-201ENST00000362588 SPRR5A0A1B0GTR4 108 aa1.06□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP12-4P60329 112 aa1.06□□□□□ -2.24
RNU4-35P-201ENST00000362588 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
RNU4-35P-201ENST00000362588 MT1AP04731 61 aa1.05□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP19-4Q3LI73 84 aa1.05□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
RNU4-35P-201ENST00000362588 BRK1Q8WUW1 75 aa1.03□□□□□ -2.24
RNU4-35P-201ENST00000362588 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
RNU4-35P-201ENST00000362588 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
RNU4-35P-201ENST00000362588 OBSCNQ5VST9 7968 aa0.97□□□□□ -2.25
RNU4-35P-201ENST00000362588 PRAC1Q96KF2 57 aa0.96□□□□□ -2.26
RNU4-35P-201ENST00000362588 MT3P25713 68 aa0.94□□□□□ -2.26
RNU4-35P-201ENST00000362588 PMAIP1Q13794 54 aa0.94□□□□□ -2.26
RNU4-35P-201ENST00000362588 PRO0628Q9UI54 55 aa0.87□□□□□ -2.27
RNU4-35P-201ENST00000362588 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
RNU4-35P-201ENST00000362588 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
RNU4-35P-201ENST00000362588 LCE1BQ5T7P3 118 aa0.85□□□□□ -2.27
RNU4-35P-201ENST00000362588 LCE1EQ5T753 118 aa0.84□□□□□ -2.27
RNU4-35P-201ENST00000362588 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
RNU4-35P-201ENST00000362588 SVIPQ8NHG7 77 aa0.84□□□□□ -2.27
RNU4-35P-201ENST00000362588 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
RNU4-35P-201ENST00000362588 LCE1CQ5T751 118 aa0.79□□□□□ -2.28
RNU4-35P-201ENST00000362588 LCE3DQ9BYE3 92 aa0.79□□□□□ -2.28
RNU4-35P-201ENST00000362588 LCE3EQ5T5B0 92 aa0.75□□□□□ -2.29
RNU4-35P-201ENST00000362588 LUZP6Q538Z0 58 aa0.74□□□□□ -2.29
RNU4-35P-201ENST00000362588 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
RNU4-35P-201ENST00000362588 LCE1FQ5T754 118 aa0.68□□□□□ -2.3
RNU4-35P-201ENST00000362588 NDUFAF8A1L188 74 aa0.64□□□□□ -2.31
RNU4-35P-201ENST00000362588 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
RNU4-35P-201ENST00000362588 MUC19Q7Z5P9 8384 aa0.62□□□□□ -2.31
RNU4-35P-201ENST00000362588 PRM1P04553 51 aa0.59□□□□□ -2.31
RNU4-35P-201ENST00000362588 A0A0A0MQY5 61 aa0.46□□□□□ -2.34
RNU4-35P-201ENST00000362588 INE1O15225 51 aa0.46□□□□□ -2.34
RNU4-35P-201ENST00000362588 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
RNU4-35P-201ENST00000362588 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
RNU4-35P-201ENST00000362588 H3BS24 57 aa0.22□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 39.9 ms