RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 TNP1P09430 55 aa1.11□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP10-12P60413 245 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP4-7Q9BYR0 210 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 CRCT1Q9UGL9 99 aa1.09□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP19-5Q3LI72 72 aa1.08□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
LTN1-201ENST00000361371 PRO2289Q9P1D8 64 aa1.06□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP12-3P60328 96 aa1.06□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP5-4Q6L8H1 288 aa1.06□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP4-3Q9BYR4 195 aa1.05□□□□□ -2.24
LTN1-201ENST00000361371 MT1EP04732 61 aa1.04□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP9-6A0A140TA67 174 aa1.03□□□□□ -2.24
LTN1-201ENST00000361371 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
LTN1-201ENST00000361371 KRTAP9-6A8MVA2 160 aa1.02□□□□□ -2.25
LTN1-201ENST00000361371 PP632Q6XCG6 107 aa1.02□□□□□ -2.25
LTN1-201ENST00000361371 MT1LQ93083 61 aa1.02□□□□□ -2.25
LTN1-201ENST00000361371 KRTAP5-9P26371 169 aa1.02□□□□□ -2.25
LTN1-201ENST00000361371 NEBP20929 6669 aa1□□□□□ -2.25
LTN1-201ENST00000361371 H3BS24 57 aa1□□□□□ -2.25
LTN1-201ENST00000361371 LCE1AQ5T7P2 110 aa0.99□□□□□ -2.25
LTN1-201ENST00000361371 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
LTN1-201ENST00000361371 MT1MQ8N339 61 aa0.98□□□□□ -2.25
LTN1-201ENST00000361371 LCE3CQ5T5A8 94 aa0.98□□□□□ -2.25
LTN1-201ENST00000361371 MT1GP13640 62 aa0.97□□□□□ -2.25
LTN1-201ENST00000361371 LCE5AQ5TCM9 118 aa0.97□□□□□ -2.25
LTN1-201ENST00000361371 A0A0A0MQY5 61 aa0.97□□□□□ -2.25
LTN1-201ENST00000361371 NDUFAF8A1L188 74 aa0.96□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP9-7A8MTY7 169 aa0.96□□□□□ -2.26
LTN1-201ENST00000361371 SPRR2EP22531 72 aa0.95□□□□□ -2.26
LTN1-201ENST00000361371 SPRR2BP35325 72 aa0.95□□□□□ -2.26
LTN1-201ENST00000361371 SPRR2AP35326 72 aa0.95□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP6-3Q3LI67 103 aa0.95□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP4-2Q9BYR5 136 aa0.95□□□□□ -2.26
LTN1-201ENST00000361371 INE1O15225 51 aa0.93□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP5-3Q6L8H2 238 aa0.92□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP9-9Q9BYP9 154 aa0.91□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP9-4Q9BYQ2 154 aa0.91□□□□□ -2.26
LTN1-201ENST00000361371 SPRR2DP22532 72 aa0.91□□□□□ -2.26
LTN1-201ENST00000361371 KRTAP4-12Q9BQ66 201 aa0.89□□□□□ -2.27
LTN1-201ENST00000361371 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
LTN1-201ENST00000361371 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
LTN1-201ENST00000361371 LUZP6Q538Z0 58 aa0.88□□□□□ -2.27
LTN1-201ENST00000361371 KRTAP4-9Q9BYQ8 210 aa0.88□□□□□ -2.27
LTN1-201ENST00000361371 KRTAP5-5Q701N2 237 aaPredicted RBP0.87□□□□□ -2.27
LTN1-201ENST00000361371 LCE3BQ5TA77 95 aa0.86□□□□□ -2.27
LTN1-201ENST00000361371 KRTAP5-1Q6L8H4 278 aa0.85□□□□□ -2.27
LTN1-201ENST00000361371 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
LTN1-201ENST00000361371 MT1AP04731 61 aa0.85□□□□□ -2.27
LTN1-201ENST00000361371 MT4P47944 62 aa0.84□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP5-7Q6L8G8 165 aa0.83□□□□□ -2.28
LTN1-201ENST00000361371 LCE1DQ5T752 114 aa0.81□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP4-4Q9BYR3 166 aa0.78□□□□□ -2.28
LTN1-201ENST00000361371 KRTAP12-4P60329 112 aa0.77□□□□□ -2.29
LTN1-201ENST00000361371 LCE4AQ5TA78 99 aa0.75□□□□□ -2.29
LTN1-201ENST00000361371 MT3P25713 68 aa0.75□□□□□ -2.29
LTN1-201ENST00000361371 LCE3DQ9BYE3 92 aa0.74□□□□□ -2.29
LTN1-201ENST00000361371 MUC19Q7Z5P9 8384 aa0.74□□□□□ -2.29
LTN1-201ENST00000361371 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
LTN1-201ENST00000361371 LCE3EQ5T5B0 92 aa0.71□□□□□ -2.3
LTN1-201ENST00000361371 LCE1FQ5T754 118 aa0.71□□□□□ -2.3
LTN1-201ENST00000361371 KRTAP4-11Q9BYQ6 195 aa0.71□□□□□ -2.3
LTN1-201ENST00000361371 LCE1BQ5T7P3 118 aa0.67□□□□□ -2.3
LTN1-201ENST00000361371 KRTAP5-11Q6L8G4 156 aa0.65□□□□□ -2.3
LTN1-201ENST00000361371 PRM1P04553 51 aa0.65□□□□□ -2.31
LTN1-201ENST00000361371 LCE1EQ5T753 118 aa0.64□□□□□ -2.31
LTN1-201ENST00000361371 LCE1CQ5T751 118 aa0.59□□□□□ -2.32
LTN1-201ENST00000361371 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
LTN1-201ENST00000361371 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
LTN1-201ENST00000361371 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms