RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
CD47-202ENST00000361309 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
CD47-202ENST00000361309 COA5Q86WW8 74 aa7.23□□□□□ -1.25
CD47-202ENST00000361309 A0A1B0GU33 70 aa7.22□□□□□ -1.25
CD47-202ENST00000361309 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
CD47-202ENST00000361309 KRTAP4-2Q9BYR5 136 aa7.2□□□□□ -1.26
CD47-202ENST00000361309 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
CD47-202ENST00000361309 TNP1P09430 55 aa7.07□□□□□ -1.28
CD47-202ENST00000361309 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
CD47-202ENST00000361309 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
CD47-202ENST00000361309 A8MU10 97 aa6.99□□□□□ -1.29
CD47-202ENST00000361309 K7ERU9 68 aa6.99□□□□□ -1.29
CD47-202ENST00000361309 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
CD47-202ENST00000361309 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
CD47-202ENST00000361309 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
CD47-202ENST00000361309 KRTAP12-4P60329 112 aa6.89□□□□□ -1.31
CD47-202ENST00000361309 A0A1B0GU69 56 aa6.87□□□□□ -1.31
CD47-202ENST00000361309 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
CD47-202ENST00000361309 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
CD47-202ENST00000361309 PCP4P48539 62 aa6.74□□□□□ -1.33
CD47-202ENST00000361309 H7BZZ5 65 aa6.73□□□□□ -1.33
CD47-202ENST00000361309 COX7CP15954 63 aa6.7□□□□□ -1.34
CD47-202ENST00000361309 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
CD47-202ENST00000361309 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
CD47-202ENST00000361309 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
CD47-202ENST00000361309 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
CD47-202ENST00000361309 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
CD47-202ENST00000361309 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
CD47-202ENST00000361309 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
CD47-202ENST00000361309 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
CD47-202ENST00000361309 MT1AP04731 61 aa6.34□□□□□ -1.39
CD47-202ENST00000361309 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
CD47-202ENST00000361309 MUC5ACP98088 5654 aa6.32□□□□□ -1.4
CD47-202ENST00000361309 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
CD47-202ENST00000361309 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
CD47-202ENST00000361309 UQCR11O14957 56 aa6.28□□□□□ -1.4
CD47-202ENST00000361309 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
CD47-202ENST00000361309 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
CD47-202ENST00000361309 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
CD47-202ENST00000361309 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
CD47-202ENST00000361309 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
CD47-202ENST00000361309 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
CD47-202ENST00000361309 K7ERS5 55 aa6.07□□□□□ -1.44
CD47-202ENST00000361309 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
CD47-202ENST00000361309 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
CD47-202ENST00000361309 MT3P25713 68 aa5.82□□□□□ -1.48
CD47-202ENST00000361309 TMEM258P61165 79 aa5.8□□□□□ -1.48
CD47-202ENST00000361309 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
CD47-202ENST00000361309 PSPHP1O15172 72 aa5.73□□□□□ -1.49
CD47-202ENST00000361309 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
CD47-202ENST00000361309 Q1T7F1 81 aa5.68□□□□□ -1.5
CD47-202ENST00000361309 V9GYY9 64 aa5.6□□□□□ -1.51
CD47-202ENST00000361309 ROMO1P60602 79 aa5.57□□□□□ -1.52
CD47-202ENST00000361309 A6NED7 52 aa5.49□□□□□ -1.53
CD47-202ENST00000361309 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
CD47-202ENST00000361309 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
CD47-202ENST00000361309 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
CD47-202ENST00000361309 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
CD47-202ENST00000361309 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
CD47-202ENST00000361309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
CD47-202ENST00000361309 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
CD47-202ENST00000361309 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
CD47-202ENST00000361309 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
CD47-202ENST00000361309 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
CD47-202ENST00000361309 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
CD47-202ENST00000361309 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
CD47-202ENST00000361309 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
CD47-202ENST00000361309 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
CD47-202ENST00000361309 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CD47-202ENST00000361309 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
CD47-202ENST00000361309 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
CD47-202ENST00000361309 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CD47-202ENST00000361309 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
CD47-202ENST00000361309 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
CD47-202ENST00000361309 PRM1P04553 51 aa2.84□□□□□ -1.95
CD47-202ENST00000361309 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
CD47-202ENST00000361309 INE1O15225 51 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms