RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 SPRR2AP35326 72 aa6.15□□□□□ -1.42
LMNA-202ENST00000361308 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
LMNA-202ENST00000361308 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
LMNA-202ENST00000361308 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
LMNA-202ENST00000361308 NEBP20929 6669 aa6.06□□□□□ -1.44
LMNA-202ENST00000361308 MT1LQ93083 61 aa6.05□□□□□ -1.44
LMNA-202ENST00000361308 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
LMNA-202ENST00000361308 MT1GP13640 62 aa6.01□□□□□ -1.45
LMNA-202ENST00000361308 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
LMNA-202ENST00000361308 SPRR2DP22532 72 aa5.94□□□□□ -1.46
LMNA-202ENST00000361308 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
LMNA-202ENST00000361308 MT1MQ8N339 61 aa5.89□□□□□ -1.47
LMNA-202ENST00000361308 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
LMNA-202ENST00000361308 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
LMNA-202ENST00000361308 H3BS24 57 aa5.77□□□□□ -1.49
LMNA-202ENST00000361308 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
LMNA-202ENST00000361308 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
LMNA-202ENST00000361308 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
LMNA-202ENST00000361308 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
LMNA-202ENST00000361308 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
LMNA-202ENST00000361308 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
LMNA-202ENST00000361308 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
LMNA-202ENST00000361308 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
LMNA-202ENST00000361308 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
LMNA-202ENST00000361308 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
LMNA-202ENST00000361308 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
LMNA-202ENST00000361308 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
LMNA-202ENST00000361308 LUZP6Q538Z0 58 aa5.34□□□□□ -1.56
LMNA-202ENST00000361308 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.56
LMNA-202ENST00000361308 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
LMNA-202ENST00000361308 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
LMNA-202ENST00000361308 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
LMNA-202ENST00000361308 MT1AP04731 61 aa5.16□□□□□ -1.58
LMNA-202ENST00000361308 MT4P47944 62 aa5.16□□□□□ -1.58
LMNA-202ENST00000361308 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
LMNA-202ENST00000361308 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
LMNA-202ENST00000361308 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
LMNA-202ENST00000361308 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
LMNA-202ENST00000361308 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
LMNA-202ENST00000361308 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
LMNA-202ENST00000361308 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
LMNA-202ENST00000361308 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
LMNA-202ENST00000361308 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
LMNA-202ENST00000361308 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
LMNA-202ENST00000361308 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
LMNA-202ENST00000361308 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
LMNA-202ENST00000361308 MT3P25713 68 aa4.72□□□□□ -1.65
LMNA-202ENST00000361308 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
LMNA-202ENST00000361308 INE1O15225 51 aa4.65□□□□□ -1.67
LMNA-202ENST00000361308 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
LMNA-202ENST00000361308 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
LMNA-202ENST00000361308 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
LMNA-202ENST00000361308 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
LMNA-202ENST00000361308 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
LMNA-202ENST00000361308 KRTAP5-8O75690 187 aa4.21□□□□□ -1.73
LMNA-202ENST00000361308 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
LMNA-202ENST00000361308 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
LMNA-202ENST00000361308 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
LMNA-202ENST00000361308 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
LMNA-202ENST00000361308 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
LMNA-202ENST00000361308 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
LMNA-202ENST00000361308 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
LMNA-202ENST00000361308 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
LMNA-202ENST00000361308 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
LMNA-202ENST00000361308 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
LMNA-202ENST00000361308 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
LMNA-202ENST00000361308 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
LMNA-202ENST00000361308 PRM1P04553 51 aa3.44□□□□□ -1.86
LMNA-202ENST00000361308 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
LMNA-202ENST00000361308 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
LMNA-202ENST00000361308 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
LMNA-202ENST00000361308 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
LMNA-202ENST00000361308 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
LMNA-202ENST00000361308 PHGR1C9JFL3 82 aa2.96□□□□□ -1.93
LMNA-202ENST00000361308 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
LMNA-202ENST00000361308 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
LMNA-202ENST00000361308 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms