RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 NEBP20929 6669 aa8.91□□□□□ -0.98
SHARPIN-201ENST00000359551 MT1LQ93083 61 aa8.88□□□□□ -0.99
SHARPIN-201ENST00000359551 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
SHARPIN-201ENST00000359551 KRTAP19-3Q7Z4W3 81 aa8.81□□□□□ -1
SHARPIN-201ENST00000359551 LCE1AQ5T7P2 110 aa8.76□□□□□ -1.01
SHARPIN-201ENST00000359551 KRTAP19-4Q3LI73 84 aa8.75□□□□□ -1.01
SHARPIN-201ENST00000359551 SPRR2EP22531 72 aa8.73□□□□□ -1.01
SHARPIN-201ENST00000359551 SPRR2BP35325 72 aa8.73□□□□□ -1.01
SHARPIN-201ENST00000359551 SPRR2AP35326 72 aa8.73□□□□□ -1.01
SHARPIN-201ENST00000359551 MT1GP13640 62 aa8.72□□□□□ -1.01
SHARPIN-201ENST00000359551 LCE5AQ5TCM9 118 aa8.7□□□□□ -1.02
SHARPIN-201ENST00000359551 LCE3CQ5T5A8 94 aa8.61□□□□□ -1.03
SHARPIN-201ENST00000359551 MT1MQ8N339 61 aa8.59□□□□□ -1.03
SHARPIN-201ENST00000359551 KRTAP20-1Q3LI63 56 aa8.56□□□□□ -1.04
SHARPIN-201ENST00000359551 KRTAP4-7Q9BYR0 210 aa8.53□□□□□ -1.04
SHARPIN-201ENST00000359551 SPRR2DP22532 72 aa8.43□□□□□ -1.06
SHARPIN-201ENST00000359551 KRTAP2-3P0C7H8 128 aa8.41□□□□□ -1.06
SHARPIN-201ENST00000359551 KRTAP2-4Q9BYR9 128 aa8.41□□□□□ -1.06
SHARPIN-201ENST00000359551 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
SHARPIN-201ENST00000359551 KRTAP4-3Q9BYR4 195 aa8.37□□□□□ -1.07
SHARPIN-201ENST00000359551 KRTAP2-2Q9BYT5 123 aa8.18□□□□□ -1.1
SHARPIN-201ENST00000359551 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
SHARPIN-201ENST00000359551 LCE3BQ5TA77 95 aa8.17□□□□□ -1.1
SHARPIN-201ENST00000359551 DSTQ03001 7570 aaKnown RBP8.16□□□□□ -1.1
SHARPIN-201ENST00000359551 KRTAP9-6A8MVA2 160 aa8.14□□□□□ -1.11
SHARPIN-201ENST00000359551 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
SHARPIN-201ENST00000359551 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
SHARPIN-201ENST00000359551 KRTAP5-5Q701N2 237 aaPredicted RBP7.81□□□□□ -1.16
SHARPIN-201ENST00000359551 KRTAP5-4Q6L8H1 288 aa7.59□□□□□ -1.19
SHARPIN-201ENST00000359551 MT1AP04731 61 aa7.57□□□□□ -1.2
SHARPIN-201ENST00000359551 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
SHARPIN-201ENST00000359551 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
SHARPIN-201ENST00000359551 KRTAP6-1Q3LI64 71 aa7.47□□□□□ -1.21
SHARPIN-201ENST00000359551 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
SHARPIN-201ENST00000359551 LCE1DQ5T752 114 aa7.38□□□□□ -1.23
SHARPIN-201ENST00000359551 MT4P47944 62 aa7.36□□□□□ -1.23
SHARPIN-201ENST00000359551 SYNE1Q8NF91 8797 aaKnown RBP7.32□□□□□ -1.24
SHARPIN-201ENST00000359551 KRTAP12-4P60329 112 aa7.27□□□□□ -1.25
SHARPIN-201ENST00000359551 GPR98Q8WXG9 6306 aa7.27□□□□□ -1.25
SHARPIN-201ENST00000359551 HMCN1Q96RW7 5635 aa7.22□□□□□ -1.25
SHARPIN-201ENST00000359551 KRTAP9-4Q9BYQ2 154 aa7.21□□□□□ -1.26
SHARPIN-201ENST00000359551 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
SHARPIN-201ENST00000359551 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
SHARPIN-201ENST00000359551 KRTAP6-2Q3LI66 62 aa6.92□□□□□ -1.3
SHARPIN-201ENST00000359551 MT3P25713 68 aa6.86□□□□□ -1.31
SHARPIN-201ENST00000359551 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
SHARPIN-201ENST00000359551 KRTAP5-2Q701N4 177 aa6.84□□□□□ -1.31
SHARPIN-201ENST00000359551 AHNAK2Q8IVF2 5795 aa6.82□□□□□ -1.32
SHARPIN-201ENST00000359551 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.35
SHARPIN-201ENST00000359551 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
SHARPIN-201ENST00000359551 LCE3DQ9BYE3 92 aa6.41□□□□□ -1.38
SHARPIN-201ENST00000359551 KRTAP5-7Q6L8G8 165 aa6.39□□□□□ -1.39
SHARPIN-201ENST00000359551 OBSCNQ5VST9 7968 aa6.31□□□□□ -1.4
SHARPIN-201ENST00000359551 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
SHARPIN-201ENST00000359551 LCE3EQ5T5B0 92 aa6.21□□□□□ -1.42
SHARPIN-201ENST00000359551 H3BS24 57 aa6.2□□□□□ -1.42
SHARPIN-201ENST00000359551 INE1O15225 51 aa6.19□□□□□ -1.42
SHARPIN-201ENST00000359551 LCE1EQ5T753 118 aa6.06□□□□□ -1.44
SHARPIN-201ENST00000359551 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
SHARPIN-201ENST00000359551 KRTAP5-1Q6L8H4 278 aa5.94□□□□□ -1.46
SHARPIN-201ENST00000359551 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
SHARPIN-201ENST00000359551 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
SHARPIN-201ENST00000359551 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.5
SHARPIN-201ENST00000359551 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.51
SHARPIN-201ENST00000359551 LCE1CQ5T751 118 aa5.63□□□□□ -1.51
SHARPIN-201ENST00000359551 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
SHARPIN-201ENST00000359551 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
SHARPIN-201ENST00000359551 PRM1P04553 51 aa5.27□□□□□ -1.57
SHARPIN-201ENST00000359551 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
SHARPIN-201ENST00000359551 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
SHARPIN-201ENST00000359551 KRTAP21-2Q3LI59 83 aa4.92□□□□□ -1.62
SHARPIN-201ENST00000359551 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
SHARPIN-201ENST00000359551 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
SHARPIN-201ENST00000359551 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
SHARPIN-201ENST00000359551 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
SHARPIN-201ENST00000359551 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
SHARPIN-201ENST00000359551 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
SHARPIN-201ENST00000359551 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 89.5 ms