RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.56
UBAP1-202ENST00000359544 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
UBAP1-202ENST00000359544 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
UBAP1-202ENST00000359544 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
UBAP1-202ENST00000359544 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
UBAP1-202ENST00000359544 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
UBAP1-202ENST00000359544 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
UBAP1-202ENST00000359544 NEBP20929 6669 aa5.18□□□□□ -1.58
UBAP1-202ENST00000359544 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
UBAP1-202ENST00000359544 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
UBAP1-202ENST00000359544 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
UBAP1-202ENST00000359544 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
UBAP1-202ENST00000359544 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
UBAP1-202ENST00000359544 SPRR2EP22531 72 aa5□□□□□ -1.61
UBAP1-202ENST00000359544 SPRR2BP35325 72 aa5□□□□□ -1.61
UBAP1-202ENST00000359544 SPRR2AP35326 72 aa5□□□□□ -1.61
UBAP1-202ENST00000359544 MT1LQ93083 61 aa4.95□□□□□ -1.62
UBAP1-202ENST00000359544 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
UBAP1-202ENST00000359544 MT1EP04732 61 aa4.88□□□□□ -1.63
UBAP1-202ENST00000359544 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
UBAP1-202ENST00000359544 SPRR2DP22532 72 aa4.82□□□□□ -1.64
UBAP1-202ENST00000359544 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
UBAP1-202ENST00000359544 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
UBAP1-202ENST00000359544 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
UBAP1-202ENST00000359544 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
UBAP1-202ENST00000359544 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
UBAP1-202ENST00000359544 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
UBAP1-202ENST00000359544 MT1GP13640 62 aa4.64□□□□□ -1.67
UBAP1-202ENST00000359544 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
UBAP1-202ENST00000359544 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
UBAP1-202ENST00000359544 MT1MQ8N339 61 aa4.54□□□□□ -1.68
UBAP1-202ENST00000359544 MT1AP04731 61 aa4.44□□□□□ -1.7
UBAP1-202ENST00000359544 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
UBAP1-202ENST00000359544 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
UBAP1-202ENST00000359544 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
UBAP1-202ENST00000359544 PRM1P04553 51 aa4.31□□□□□ -1.72
UBAP1-202ENST00000359544 MT4P47944 62 aa4.28□□□□□ -1.72
UBAP1-202ENST00000359544 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
UBAP1-202ENST00000359544 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
UBAP1-202ENST00000359544 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
UBAP1-202ENST00000359544 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
UBAP1-202ENST00000359544 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
UBAP1-202ENST00000359544 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
UBAP1-202ENST00000359544 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
UBAP1-202ENST00000359544 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
UBAP1-202ENST00000359544 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
UBAP1-202ENST00000359544 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
UBAP1-202ENST00000359544 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
UBAP1-202ENST00000359544 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
UBAP1-202ENST00000359544 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
UBAP1-202ENST00000359544 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
UBAP1-202ENST00000359544 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
UBAP1-202ENST00000359544 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
UBAP1-202ENST00000359544 MT3P25713 68 aa3.73□□□□□ -1.81
UBAP1-202ENST00000359544 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
UBAP1-202ENST00000359544 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
UBAP1-202ENST00000359544 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
UBAP1-202ENST00000359544 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
UBAP1-202ENST00000359544 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
UBAP1-202ENST00000359544 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
UBAP1-202ENST00000359544 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
UBAP1-202ENST00000359544 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
UBAP1-202ENST00000359544 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
UBAP1-202ENST00000359544 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
UBAP1-202ENST00000359544 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
UBAP1-202ENST00000359544 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
UBAP1-202ENST00000359544 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
UBAP1-202ENST00000359544 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
UBAP1-202ENST00000359544 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
UBAP1-202ENST00000359544 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
UBAP1-202ENST00000359544 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
UBAP1-202ENST00000359544 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
UBAP1-202ENST00000359544 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
UBAP1-202ENST00000359544 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
UBAP1-202ENST00000359544 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
UBAP1-202ENST00000359544 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
UBAP1-202ENST00000359544 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 66.9 ms