RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
ATXN3-202ENST00000359366 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
ATXN3-202ENST00000359366 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
ATXN3-202ENST00000359366 MT1FP04733 61 aa2.27□□□□□ -2.05
ATXN3-202ENST00000359366 MT2AP02795 61 aa2.27□□□□□ -2.05
ATXN3-202ENST00000359366 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
ATXN3-202ENST00000359366 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
ATXN3-202ENST00000359366 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
ATXN3-202ENST00000359366 USH2AO75445 5202 aa2.23□□□□□ -2.05
ATXN3-202ENST00000359366 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ATXN3-202ENST00000359366 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
ATXN3-202ENST00000359366 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
ATXN3-202ENST00000359366 NEBP20929 6669 aa2.18□□□□□ -2.06
ATXN3-202ENST00000359366 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
ATXN3-202ENST00000359366 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
ATXN3-202ENST00000359366 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
ATXN3-202ENST00000359366 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
ATXN3-202ENST00000359366 MT1BP07438 61 aa2.14□□□□□ -2.07
ATXN3-202ENST00000359366 KRTAP20-1Q3LI63 56 aa2.14□□□□□ -2.07
ATXN3-202ENST00000359366 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
ATXN3-202ENST00000359366 KMT2DO14686 5537 aa2.11□□□□□ -2.07
ATXN3-202ENST00000359366 MT1XP80297 61 aa2.09□□□□□ -2.07
ATXN3-202ENST00000359366 KRTAP10-5P60370 271 aa2.09□□□□□ -2.07
ATXN3-202ENST00000359366 TNP1P09430 55 aa2.06□□□□□ -2.08
ATXN3-202ENST00000359366 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
ATXN3-202ENST00000359366 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
ATXN3-202ENST00000359366 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
ATXN3-202ENST00000359366 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
ATXN3-202ENST00000359366 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
ATXN3-202ENST00000359366 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
ATXN3-202ENST00000359366 MT3P25713 68 aa1.96□□□□□ -2.1
ATXN3-202ENST00000359366 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
ATXN3-202ENST00000359366 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
ATXN3-202ENST00000359366 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
ATXN3-202ENST00000359366 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
ATXN3-202ENST00000359366 KRTAP2-3P0C7H8 128 aa1.87□□□□□ -2.11
ATXN3-202ENST00000359366 KRTAP2-4Q9BYR9 128 aa1.87□□□□□ -2.11
ATXN3-202ENST00000359366 KRTAP19-7Q3SYF9 63 aa1.86□□□□□ -2.11
ATXN3-202ENST00000359366 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
ATXN3-202ENST00000359366 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
ATXN3-202ENST00000359366 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
ATXN3-202ENST00000359366 MT1EP04732 61 aa1.81□□□□□ -2.12
ATXN3-202ENST00000359366 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
ATXN3-202ENST00000359366 MT1LQ93083 61 aa1.79□□□□□ -2.12
ATXN3-202ENST00000359366 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
ATXN3-202ENST00000359366 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
ATXN3-202ENST00000359366 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
ATXN3-202ENST00000359366 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
ATXN3-202ENST00000359366 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
ATXN3-202ENST00000359366 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
ATXN3-202ENST00000359366 MT1MQ8N339 61 aa1.71□□□□□ -2.14
ATXN3-202ENST00000359366 MT1GP13640 62 aa1.7□□□□□ -2.14
ATXN3-202ENST00000359366 SPRR2EP22531 72 aa1.66□□□□□ -2.14
ATXN3-202ENST00000359366 SPRR2BP35325 72 aa1.66□□□□□ -2.14
ATXN3-202ENST00000359366 SPRR2AP35326 72 aa1.66□□□□□ -2.14
ATXN3-202ENST00000359366 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.15
ATXN3-202ENST00000359366 SPRR2DP22532 72 aa1.59□□□□□ -2.15
ATXN3-202ENST00000359366 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
ATXN3-202ENST00000359366 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
ATXN3-202ENST00000359366 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
ATXN3-202ENST00000359366 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
ATXN3-202ENST00000359366 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
ATXN3-202ENST00000359366 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
ATXN3-202ENST00000359366 MT1AP04731 61 aa1.49□□□□□ -2.17
ATXN3-202ENST00000359366 MT4P47944 62 aa1.44□□□□□ -2.18
ATXN3-202ENST00000359366 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
ATXN3-202ENST00000359366 PRM1P04553 51 aa1.4□□□□□ -2.19
ATXN3-202ENST00000359366 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
ATXN3-202ENST00000359366 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
ATXN3-202ENST00000359366 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
ATXN3-202ENST00000359366 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
ATXN3-202ENST00000359366 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
ATXN3-202ENST00000359366 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 322.9 ms