RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
CCDC197-201ENST00000359253 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
CCDC197-201ENST00000359253 NEBP20929 6669 aa4.98□□□□□ -1.61
CCDC197-201ENST00000359253 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
CCDC197-201ENST00000359253 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
CCDC197-201ENST00000359253 MT1EP04732 61 aa4.88□□□□□ -1.63
CCDC197-201ENST00000359253 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
CCDC197-201ENST00000359253 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
CCDC197-201ENST00000359253 SPRR2EP22531 72 aa4.85□□□□□ -1.63
CCDC197-201ENST00000359253 SPRR2BP35325 72 aa4.85□□□□□ -1.63
CCDC197-201ENST00000359253 SPRR2AP35326 72 aa4.85□□□□□ -1.63
CCDC197-201ENST00000359253 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CCDC197-201ENST00000359253 MT1LQ93083 61 aa4.79□□□□□ -1.64
CCDC197-201ENST00000359253 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
CCDC197-201ENST00000359253 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
CCDC197-201ENST00000359253 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
CCDC197-201ENST00000359253 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
CCDC197-201ENST00000359253 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CCDC197-201ENST00000359253 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
CCDC197-201ENST00000359253 MT1GP13640 62 aa4.71□□□□□ -1.66
CCDC197-201ENST00000359253 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
CCDC197-201ENST00000359253 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CCDC197-201ENST00000359253 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
CCDC197-201ENST00000359253 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
CCDC197-201ENST00000359253 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
CCDC197-201ENST00000359253 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
CCDC197-201ENST00000359253 MT1MQ8N339 61 aa4.59□□□□□ -1.67
CCDC197-201ENST00000359253 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
CCDC197-201ENST00000359253 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
CCDC197-201ENST00000359253 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
CCDC197-201ENST00000359253 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
CCDC197-201ENST00000359253 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
CCDC197-201ENST00000359253 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
CCDC197-201ENST00000359253 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
CCDC197-201ENST00000359253 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
CCDC197-201ENST00000359253 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
CCDC197-201ENST00000359253 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
CCDC197-201ENST00000359253 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
CCDC197-201ENST00000359253 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
CCDC197-201ENST00000359253 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CCDC197-201ENST00000359253 MT1AP04731 61 aa4.11□□□□□ -1.75
CCDC197-201ENST00000359253 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
CCDC197-201ENST00000359253 MT4P47944 62 aa4.05□□□□□ -1.76
CCDC197-201ENST00000359253 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CCDC197-201ENST00000359253 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CCDC197-201ENST00000359253 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CCDC197-201ENST00000359253 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CCDC197-201ENST00000359253 INE1O15225 51 aa3.91□□□□□ -1.78
CCDC197-201ENST00000359253 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CCDC197-201ENST00000359253 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CCDC197-201ENST00000359253 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
CCDC197-201ENST00000359253 MT3P25713 68 aa3.75□□□□□ -1.81
CCDC197-201ENST00000359253 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CCDC197-201ENST00000359253 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
CCDC197-201ENST00000359253 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
CCDC197-201ENST00000359253 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
CCDC197-201ENST00000359253 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CCDC197-201ENST00000359253 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
CCDC197-201ENST00000359253 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
CCDC197-201ENST00000359253 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CCDC197-201ENST00000359253 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
CCDC197-201ENST00000359253 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CCDC197-201ENST00000359253 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
CCDC197-201ENST00000359253 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
CCDC197-201ENST00000359253 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
CCDC197-201ENST00000359253 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
CCDC197-201ENST00000359253 PRM1P04553 51 aa3.03□□□□□ -1.92
CCDC197-201ENST00000359253 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
CCDC197-201ENST00000359253 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
CCDC197-201ENST00000359253 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CCDC197-201ENST00000359253 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
CCDC197-201ENST00000359253 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CCDC197-201ENST00000359253 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CCDC197-201ENST00000359253 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
CCDC197-201ENST00000359253 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
CCDC197-201ENST00000359253 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CCDC197-201ENST00000359253 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CCDC197-201ENST00000359253 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 67.7 ms