RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SPRR2AP35326 72 aa4.06□□□□□ -1.76
TRAPPC4-201ENST00000359005 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
TRAPPC4-201ENST00000359005 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
TRAPPC4-201ENST00000359005 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
TRAPPC4-201ENST00000359005 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
TRAPPC4-201ENST00000359005 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
TRAPPC4-201ENST00000359005 H3BS24 57 aa4□□□□□ -1.77
TRAPPC4-201ENST00000359005 LUZP6Q538Z0 58 aa4□□□□□ -1.77
TRAPPC4-201ENST00000359005 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
TRAPPC4-201ENST00000359005 SPRR2DP22532 72 aa3.92□□□□□ -1.78
TRAPPC4-201ENST00000359005 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
TRAPPC4-201ENST00000359005 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
TRAPPC4-201ENST00000359005 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
TRAPPC4-201ENST00000359005 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
TRAPPC4-201ENST00000359005 MT1EP04732 61 aa3.86□□□□□ -1.79
TRAPPC4-201ENST00000359005 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
TRAPPC4-201ENST00000359005 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
TRAPPC4-201ENST00000359005 MT1LQ93083 61 aa3.79□□□□□ -1.8
TRAPPC4-201ENST00000359005 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
TRAPPC4-201ENST00000359005 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
TRAPPC4-201ENST00000359005 MT1GP13640 62 aa3.76□□□□□ -1.81
TRAPPC4-201ENST00000359005 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
TRAPPC4-201ENST00000359005 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
TRAPPC4-201ENST00000359005 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
TRAPPC4-201ENST00000359005 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
TRAPPC4-201ENST00000359005 MT1MQ8N339 61 aa3.63□□□□□ -1.83
TRAPPC4-201ENST00000359005 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
TRAPPC4-201ENST00000359005 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
TRAPPC4-201ENST00000359005 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
TRAPPC4-201ENST00000359005 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
TRAPPC4-201ENST00000359005 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TRAPPC4-201ENST00000359005 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
TRAPPC4-201ENST00000359005 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
TRAPPC4-201ENST00000359005 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
TRAPPC4-201ENST00000359005 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
TRAPPC4-201ENST00000359005 MT4P47944 62 aa3.47□□□□□ -1.85
TRAPPC4-201ENST00000359005 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
TRAPPC4-201ENST00000359005 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
TRAPPC4-201ENST00000359005 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
TRAPPC4-201ENST00000359005 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TRAPPC4-201ENST00000359005 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
TRAPPC4-201ENST00000359005 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC4-201ENST00000359005 INE1O15225 51 aa3.27□□□□□ -1.89
TRAPPC4-201ENST00000359005 MT1AP04731 61 aa3.26□□□□□ -1.89
TRAPPC4-201ENST00000359005 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
TRAPPC4-201ENST00000359005 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
TRAPPC4-201ENST00000359005 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
TRAPPC4-201ENST00000359005 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
TRAPPC4-201ENST00000359005 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
TRAPPC4-201ENST00000359005 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
TRAPPC4-201ENST00000359005 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
TRAPPC4-201ENST00000359005 MT3P25713 68 aa3.01□□□□□ -1.93
TRAPPC4-201ENST00000359005 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
TRAPPC4-201ENST00000359005 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
TRAPPC4-201ENST00000359005 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
TRAPPC4-201ENST00000359005 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
TRAPPC4-201ENST00000359005 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
TRAPPC4-201ENST00000359005 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
TRAPPC4-201ENST00000359005 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
TRAPPC4-201ENST00000359005 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC4-201ENST00000359005 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
TRAPPC4-201ENST00000359005 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
TRAPPC4-201ENST00000359005 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
TRAPPC4-201ENST00000359005 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
TRAPPC4-201ENST00000359005 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
TRAPPC4-201ENST00000359005 PRM1P04553 51 aa2.46□□□□□ -2.02
TRAPPC4-201ENST00000359005 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
TRAPPC4-201ENST00000359005 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
TRAPPC4-201ENST00000359005 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC4-201ENST00000359005 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
TRAPPC4-201ENST00000359005 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
TRAPPC4-201ENST00000359005 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
TRAPPC4-201ENST00000359005 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
TRAPPC4-201ENST00000359005 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
TRAPPC4-201ENST00000359005 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
TRAPPC4-201ENST00000359005 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
TRAPPC4-201ENST00000359005 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 68.2 ms