RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LCE3AQ5TA76 89 aa9.03□□□□□ -0.96
ALKAL1-201ENST00000358543 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
ALKAL1-201ENST00000358543 MT1EP04732 61 aa9□□□□□ -0.97
ALKAL1-201ENST00000358543 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
ALKAL1-201ENST00000358543 KRTAP4-11Q9BYQ6 195 aa8.9□□□□□ -0.98
ALKAL1-201ENST00000358543 KRTAP20-1Q3LI63 56 aa8.87□□□□□ -0.99
ALKAL1-201ENST00000358543 SPRR2DP22532 72 aa8.85□□□□□ -0.99
ALKAL1-201ENST00000358543 ROMO1P60602 79 aa8.82□□□□□ -1
ALKAL1-201ENST00000358543 KRTAP19-3Q7Z4W3 81 aa8.82□□□□□ -1
ALKAL1-201ENST00000358543 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
ALKAL1-201ENST00000358543 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
ALKAL1-201ENST00000358543 LCE5AQ5TCM9 118 aa8.79□□□□□ -1
ALKAL1-201ENST00000358543 KRTAP23-1A1A580 65 aa8.77□□□□□ -1.01
ALKAL1-201ENST00000358543 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
ALKAL1-201ENST00000358543 MT1GP13640 62 aa8.7□□□□□ -1.02
ALKAL1-201ENST00000358543 MT1LQ93083 61 aa8.68□□□□□ -1.02
ALKAL1-201ENST00000358543 LCE4AQ5TA78 99 aa8.66□□□□□ -1.02
ALKAL1-201ENST00000358543 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
ALKAL1-201ENST00000358543 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
ALKAL1-201ENST00000358543 KRTAP2-2Q9BYT5 123 aa8.56□□□□□ -1.04
ALKAL1-201ENST00000358543 KRTAP2-1Q9BYU5 128 aa8.56□□□□□ -1.04
ALKAL1-201ENST00000358543 KRTAP5-3Q6L8H2 238 aa8.52□□□□□ -1.05
ALKAL1-201ENST00000358543 MT1MQ8N339 61 aa8.52□□□□□ -1.05
ALKAL1-201ENST00000358543 DSTQ03001 7570 aaKnown RBP8.43□□□□□ -1.06
ALKAL1-201ENST00000358543 KRTAP19-4Q3LI73 84 aa8.35□□□□□ -1.07
ALKAL1-201ENST00000358543 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
ALKAL1-201ENST00000358543 KRTAP4-3Q9BYR4 195 aa8.26□□□□□ -1.09
ALKAL1-201ENST00000358543 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
ALKAL1-201ENST00000358543 LCE3CQ5T5A8 94 aa8.08□□□□□ -1.12
ALKAL1-201ENST00000358543 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
ALKAL1-201ENST00000358543 H3BS24 57 aa7.86□□□□□ -1.15
ALKAL1-201ENST00000358543 KRTAP5-4Q6L8H1 288 aa7.86□□□□□ -1.15
ALKAL1-201ENST00000358543 KRTAP5-5Q701N2 237 aaPredicted RBP7.78□□□□□ -1.16
ALKAL1-201ENST00000358543 PRAC1Q96KF2 57 aa7.7□□□□□ -1.18
ALKAL1-201ENST00000358543 MT4P47944 62 aa7.68□□□□□ -1.18
ALKAL1-201ENST00000358543 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
ALKAL1-201ENST00000358543 KRTAP9-6A8MVA2 160 aa7.59□□□□□ -1.19
ALKAL1-201ENST00000358543 KTN1-AS1Q86SY8 53 aa7.53□□□□□ -1.2
ALKAL1-201ENST00000358543 KRTAP12-4P60329 112 aa7.45□□□□□ -1.22
ALKAL1-201ENST00000358543 SYNE1Q8NF91 8797 aaKnown RBP7.44□□□□□ -1.22
ALKAL1-201ENST00000358543 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
ALKAL1-201ENST00000358543 MT1AP04731 61 aa7.4□□□□□ -1.22
ALKAL1-201ENST00000358543 KRTAP20-2Q3LI61 65 aa7.35□□□□□ -1.23
ALKAL1-201ENST00000358543 KRTAP6-1Q3LI64 71 aa7.3□□□□□ -1.24
ALKAL1-201ENST00000358543 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
ALKAL1-201ENST00000358543 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
ALKAL1-201ENST00000358543 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
ALKAL1-201ENST00000358543 KRTAP5-2Q701N4 177 aa6.97□□□□□ -1.29
ALKAL1-201ENST00000358543 KRTAP5-10Q6L8G5 202 aa6.93□□□□□ -1.3
ALKAL1-201ENST00000358543 KRTAP6-2Q3LI66 62 aa6.88□□□□□ -1.31
ALKAL1-201ENST00000358543 MT3P25713 68 aa6.76□□□□□ -1.33
ALKAL1-201ENST00000358543 KRTAP5-7Q6L8G8 165 aa6.6□□□□□ -1.35
ALKAL1-201ENST00000358543 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
ALKAL1-201ENST00000358543 OBSCNQ5VST9 7968 aa6.38□□□□□ -1.39
ALKAL1-201ENST00000358543 KRTAP5-8O75690 187 aa6.37□□□□□ -1.39
ALKAL1-201ENST00000358543 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.31□□□□□ -1.4
ALKAL1-201ENST00000358543 KRTAP5-1Q6L8H4 278 aa6.15□□□□□ -1.42
ALKAL1-201ENST00000358543 LCE1EQ5T753 118 aa6.11□□□□□ -1.43
ALKAL1-201ENST00000358543 MUC5ACP98088 5654 aa6.02□□□□□ -1.45
ALKAL1-201ENST00000358543 KRTAP5-11Q6L8G4 156 aa5.97□□□□□ -1.45
ALKAL1-201ENST00000358543 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
ALKAL1-201ENST00000358543 MUC5BQ9HC84 5762 aaPredicted RBP5.82□□□□□ -1.48
ALKAL1-201ENST00000358543 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
ALKAL1-201ENST00000358543 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
ALKAL1-201ENST00000358543 LCE1CQ5T751 118 aa5.66□□□□□ -1.5
ALKAL1-201ENST00000358543 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
ALKAL1-201ENST00000358543 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
ALKAL1-201ENST00000358543 KRTAP4-4Q9BYR3 166 aa5.22□□□□□ -1.57
ALKAL1-201ENST00000358543 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
ALKAL1-201ENST00000358543 LCE1FQ5T754 118 aa4.84□□□□□ -1.63
ALKAL1-201ENST00000358543 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
ALKAL1-201ENST00000358543 INE1O15225 51 aa4.67□□□□□ -1.66
ALKAL1-201ENST00000358543 PRM1P04553 51 aa4.51□□□□□ -1.69
ALKAL1-201ENST00000358543 PHGR1C9JFL3 82 aa4.36□□□□□ -1.71
ALKAL1-201ENST00000358543 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
ALKAL1-201ENST00000358543 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
ALKAL1-201ENST00000358543 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms