RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
CNGA1-201ENST00000358519 M0QZ58 72 aa1.92□□□□□ -2.1
CNGA1-201ENST00000358519 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
CNGA1-201ENST00000358519 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
CNGA1-201ENST00000358519 CAMK2N1Q7Z7J9 78 aa1.87□□□□□ -2.11
CNGA1-201ENST00000358519 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
CNGA1-201ENST00000358519 M0R2T5 61 aa1.86□□□□□ -2.11
CNGA1-201ENST00000358519 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.12
CNGA1-201ENST00000358519 MT1HP80294 61 aa1.83□□□□□ -2.12
CNGA1-201ENST00000358519 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
CNGA1-201ENST00000358519 USH2AO75445 5202 aa1.82□□□□□ -2.12
CNGA1-201ENST00000358519 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
CNGA1-201ENST00000358519 R4GN34 69 aa1.82□□□□□ -2.12
CNGA1-201ENST00000358519 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
CNGA1-201ENST00000358519 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
CNGA1-201ENST00000358519 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
CNGA1-201ENST00000358519 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
CNGA1-201ENST00000358519 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
CNGA1-201ENST00000358519 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
CNGA1-201ENST00000358519 LCE3AQ5TA76 89 aa1.78□□□□□ -2.12
CNGA1-201ENST00000358519 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
CNGA1-201ENST00000358519 INE1O15225 51 aa1.75□□□□□ -2.13
CNGA1-201ENST00000358519 NEBP20929 6669 aa1.75□□□□□ -2.13
CNGA1-201ENST00000358519 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
CNGA1-201ENST00000358519 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
CNGA1-201ENST00000358519 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CNGA1-201ENST00000358519 TNP1P09430 55 aa1.7□□□□□ -2.14
CNGA1-201ENST00000358519 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
CNGA1-201ENST00000358519 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
CNGA1-201ENST00000358519 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
CNGA1-201ENST00000358519 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
CNGA1-201ENST00000358519 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.14
CNGA1-201ENST00000358519 MT2AP02795 61 aa1.65□□□□□ -2.15
CNGA1-201ENST00000358519 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CNGA1-201ENST00000358519 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CNGA1-201ENST00000358519 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
CNGA1-201ENST00000358519 MT1FP04733 61 aa1.62□□□□□ -2.15
CNGA1-201ENST00000358519 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
CNGA1-201ENST00000358519 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
CNGA1-201ENST00000358519 KMT2DO14686 5537 aa1.6□□□□□ -2.15
CNGA1-201ENST00000358519 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CNGA1-201ENST00000358519 MT1BP07438 61 aa1.56□□□□□ -2.16
CNGA1-201ENST00000358519 SPRR2EP22531 72 aa1.55□□□□□ -2.16
CNGA1-201ENST00000358519 SPRR2BP35325 72 aa1.55□□□□□ -2.16
CNGA1-201ENST00000358519 SPRR2AP35326 72 aa1.55□□□□□ -2.16
CNGA1-201ENST00000358519 LCE3CQ5T5A8 94 aa1.55□□□□□ -2.16
CNGA1-201ENST00000358519 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
CNGA1-201ENST00000358519 MT1XP80297 61 aa1.52□□□□□ -2.17
CNGA1-201ENST00000358519 SPRR2DP22532 72 aa1.51□□□□□ -2.17
CNGA1-201ENST00000358519 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
CNGA1-201ENST00000358519 SPRR2FQ96RM1 72 aa1.5□□□□□ -2.17
CNGA1-201ENST00000358519 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CNGA1-201ENST00000358519 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CNGA1-201ENST00000358519 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
CNGA1-201ENST00000358519 MT1EP04732 61 aa1.39□□□□□ -2.19
CNGA1-201ENST00000358519 MT1GP13640 62 aa1.37□□□□□ -2.19
CNGA1-201ENST00000358519 KRTAP19-5Q3LI72 72 aa1.37□□□□□ -2.19
CNGA1-201ENST00000358519 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
CNGA1-201ENST00000358519 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CNGA1-201ENST00000358519 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
CNGA1-201ENST00000358519 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
CNGA1-201ENST00000358519 MT1LQ93083 61 aa1.35□□□□□ -2.19
CNGA1-201ENST00000358519 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
CNGA1-201ENST00000358519 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
CNGA1-201ENST00000358519 MT4P47944 62 aa1.31□□□□□ -2.2
CNGA1-201ENST00000358519 MT1MQ8N339 61 aa1.29□□□□□ -2.2
CNGA1-201ENST00000358519 MT1AP04731 61 aa1.21□□□□□ -2.22
CNGA1-201ENST00000358519 PRM1P04553 51 aa1.19□□□□□ -2.22
CNGA1-201ENST00000358519 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
CNGA1-201ENST00000358519 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
CNGA1-201ENST00000358519 LCE3DQ9BYE3 92 aa1.14□□□□□ -2.23
CNGA1-201ENST00000358519 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
CNGA1-201ENST00000358519 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.24
CNGA1-201ENST00000358519 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
CNGA1-201ENST00000358519 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
CNGA1-201ENST00000358519 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CNGA1-201ENST00000358519 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 67.1 ms